Return to main results Retrieve Phyre Job Id

Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank237Aligned Residues266
% Identity21%Templatec3tacA_
PDB info PDB header:transferase/protein bindingChain: A: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: crystal structure of the liprin-alpha/cask complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290. ........300. ...
Predicted Secondary structure 




















.


......

Query SS confidence 







































.









. . . . . .


Query Sequence  CLPATSGFSYEKWEIDPSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAI. . . . . . NEG
Query Conservation              


      
   

 
 

 
  
   .    



 
......   
Alig confidence 







































.









......


Template Conservation        
            
 
   

 
 

 

 
        



 
         
Template Sequence  HSSGLVPSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP
Template Known Secondary structure 











SS

SSTTT

TST
Template Predicted Secondary structure 




























Template SS confidence 



























































  
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D