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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank309Aligned Residues233
% Identity24%Templatec3pg1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase, putative (map kinase-like PDBTitle: map kinase lmampk10 from leishmania major (1.95 angs resolution)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300....... ..310.....
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Query Sequence  PSELAFVKEIGSGQFGVVHLGEWRAHIPVAIKAINEGSMS. . . . . . . . . . . . EEDFIEEA
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Template Sequence  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI
Template Known Secondary structure  T
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   20.........30.........40.........50.........60.........70.........
 
   316...320.........330...... ...340.........350.........360.........370
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Query Sequence  KVMMKLSHSRLVQLYGVCIQQ. . . . . KPLYIVTEFMENGCLLDYLRERKGQLQKALLLSM
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Template Sequence  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI. VISPQHIQYF
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S

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   80.........90.........100.........110.........120........ .130........
 
   371........380.........390.........400.........410.........420.........430
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Query Sequence  CQDICEGMAYLERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPV
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Template Sequence  MYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLHRW. . . . . . . . . . . . . . . .
Template Known Secondary structure  TT






GGG
TT



TT

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   139140.........150.........160.........170.........180..
 
   431........440.........450.........460.........470.........480......
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Query Sequence  KWCPPEVFHFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLY. . . .
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Template Sequence  YRAPELVMQFKGFTKLVDMWSAGCVMAEMFN. RKALFRGSTFYNQLNKIVEVVGTPKIED
Template Known Secondary structure  G

TT
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   198.200.........210.........220........ .230.........240.........250......
 
   487..490.........500.........510........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . RPHLAPMTIYRVMYSCWHESPKGRPTFAELLQ
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Template Sequence  VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR
Template Known Secondary structure  TS
TTT








STTS
T
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T
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   257..260.........270.........280.........290.........300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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