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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank99Aligned Residues239
% Identity21%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280.... .....290.........300.........310.........320. ..
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Query Sequence  IDPSELAFVKEIGSGQFGV. VHLGEWRAHIPVAIKAINEGSMSEEDFIEEAKVMMKL. SH
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMFDNR. DVAVKRILPECFSFAD. . REVQLLRESDEH
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SS
B
STT
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   566...570.........580.........590.... .....600.........610 .........620..
 
   324.....330.........340.........350.........360.........370.........380...
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Query Sequence  SRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLER
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Template Sequence  PNVIRYFCTEKDRQFQYIAIELCA. ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS
Template Known Secondary structure  TTB


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   623......630.........640...... ...650.........660.........670.........680.
 
   384.....390.........400... ......410.........420.........430........
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Query Sequence  SCYIHRDLAARNCLVSSACV. . . . . VKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVF
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Template Sequence  LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAP. . . . . . . . . . GTEGWIAPEML
Template Known Secondary structure  TT





SGGG


BTTTB




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GGGG
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   682.......690.........700.........710.........720 .........730.
 
   439440.........450.........460.........470.........480 .........490......
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Query Sequence  HFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAIS. . QGFRLYRPHLAPMTIY
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Template Sequence  SEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAR
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   744.....750.........760.........770.........780.........790.........800...
 
   497..500.........510........
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Query Sequence  RVMYSCWHESPKGRPTFAELLQ
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Template Sequence  ELIEKMIAMDPQKRPSAKHVLK
Template Known Secondary structure  T
SSGGG


T
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   807..810.........820........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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