Return to main results Retrieve Phyre Job Id

Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank302Aligned Residues237
% Identity24%Templatec3n9xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase; PDBTitle: crystal structure of map kinase from plasmodium berghei, pb000659.00.0
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300.........310 .........320....
Predicted Secondary structure 








.





...



Query SS confidence 























.

















. . .













Query Sequence  SELAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAINEGSMSEED. . . FIEEAKVMMKLSHS
Query Conservation      
   

 
 

 
  
    .   



 
         ...   
  

  
 

Alig confidence 























.

















...













Template Conservation    
 
   

 
 

 
  
        



 
               

 

  
 

Template Sequence  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD
Template Known Secondary structure  TTTTTTTT
STTTS


T
Template Predicted Secondary structure 

















Template SS confidence 



























































   26...30.........40.........50.........60.........70.........80.....
 
   325....330...... ...340.........350.........360.........370.........
Predicted Secondary structure 

.....












Query SS confidence 











. . . . .










































Query Sequence  RLVQLYGVCIQQ. . . . . KPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMA
Query Conservation 


 
 
     .....    

 
    


   
      
       
  


 

 
Alig confidence 











.....


















..





















Template Conservation 


                     
           ..                      
Template Sequence  YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK. . TPIFLTEEHIKTILYNLLLGEN
Template Known Secondary structure  TB




S
TTT




S..SS



Template Predicted Secondary structure 




























..







Template SS confidence 



























































   86...90.........100.........110.........120. ........130.........140...
 
   380.........390.........400.........410.........420.........430.........
Predicted Secondary structure 





































Query SS confidence 



























































Query Sequence  YLERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFH
Query Conservation 


   






  



      

 




                
    


 
 
Alig confidence 

































..........















Template Conservation                                
 
 ..........     
          
Template Sequence  FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR. . . . . . . . . . TIHVVTRWYRAPELIL
Template Known Secondary structure  TT




GGG
TT




TT
..........





TT

T
Template Predicted Secondary structure 

































..........















Template SS confidence 



























































   144.....150.........160.........170....... ..180.........190...
 
   440.. .......450.........460.........470.
Predicted Secondary structure 


.











...........................
Query SS confidence 


.




























. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  FNK. YSSKSDVWSFGVLMWEVFTEGKMPFENKS. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     . 
 





 



 

 
 
  
     ...........................
Alig confidence 


.


















.








...........................
Template Conservation                
    

  .
                                   
Template Sequence  LQENYTKSIDIWSTGCIFAELLN. MLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNIIF
Template Known Secondary structure  T
S


TT.T
TTT
SSGGG


S


S
S


Template Predicted Secondary structure 











.


























Template SS confidence 



























































   225....230.........240....... ..250.........260.........270.........280...
 
   472.......480...... ...490.........500.........510
Predicted Secondary structure  ..................





...










Query SS confidence  . . . . . . . . . . . . . . . . . .














. . .























Query Sequence  . . . . . . . . . . . . . . . . . . NLQVVEAISQGFRLY. . . RPHLAPMTIYRVMYSCWHESPKGR
Query Conservation  ..................  
    
  
    ... 
   
  
  

  
   

  
Alig confidence  ..................














...























Template Conservation                                           
    


   
  

  
Template Sequence  NIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKR
Template Known Secondary structure 
S

T


TS






STTS
S
SSTTTS
Template Predicted Secondary structure 


























Template SS confidence 



























































   294.....300.........310.........320.........330.........340.........350...
 
   511.......
Predicted Secondary structure 

Query SS confidence 







Query Sequence  PTFAELLQ
Query Conservation 

   
  
Alig confidence 







Template Conservation   

 
 
 
Template Sequence  ITIDQALD
Template Known Secondary structure 

T
Template Predicted Secondary structure 


Template SS confidence 







   354.....360.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D