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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank77Aligned Residues240
% Identity25%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300.........310.........320.......
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMSEEDFIEEAKVMMKLSHSRLV
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIM
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   60.........70.. .......80.........90..... ....100.........110....
 
   328.330.........340.........350.........360.........370.........380.......
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Query Sequence  QLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSCYI
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Template Sequence  KLYDFFEDKRNYYLVMECYKGGELFDEIIHR. MKFNEVDAAVIIKQVLSGVTYLHKHNIV
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SS


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   123......130.........140.........150... ......160.........170.........180.
 
   388.390........ .400.........410.........420.........430.........440....
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Query Sequence  HRDLAARNCLV. . . SSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYS
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Template Sequence  HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK. . KMKERLGTAYYIAPEVLRK. KYD
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SGGGS
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BTTB..
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   182.......190.........200.........210...... ...220.........230..... ...
 
   445....450.........460.........470.........480... ......490.........500.
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Query Sequence  SKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGF. . . RLYRPHLAPMTIYRVMYS
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Template Sequence  EKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ
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   239240.........250..... ....260.........270.........280.........290.......
 
   502.......510........
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Query Sequence  CWHESPKGRPTFAELLQ
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Template Sequence  MLQFDSQRRISAQQALE
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SSTTTS

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   298.300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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