Job Description P42682 Confidence 99.71% Date Tue Jul 30 13:16:14 BST 2013 Rank 412 Aligned Residues 86 % Identity 20% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		I	Y	E	W	Y	H	K	N	I	T	R	N	Q	T	E	R	L	L	R	Q	E	A	K	E	G	A	F	I	V	R	D	S	R	H	.	L	G	S	Y	T	I	S	V	F	T	R	A	R	R	H	T	Q	S	S	I	K	H	Y	Q	I
Query Conservation																																				.
Alig confidence								.															.													.															.	.	.	.	.
Template Conservation								.															.																												.	.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	.	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	.	.	.	.	.	F	Q	H	V	D	I
Template Known Secondary structure		T		T	T	B		.												T	T	S	.		T	T									S	T	T											T	T		.	.	.	.	.
Template Predicted Secondary structure								.															.																												.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.
		206	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		K	K	.	.	N	D	S	G	Q	W	Y	I	T	E	R	H	L	F	P	S	V	P	E	L	I	Q	Y	H	Q	Y	N	A	A	G	L	I
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L	L
Template Known Secondary structure														S	S	S				S	S															T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D