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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank218Aligned Residues236
% Identity23%Templatec3fmeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: crystal structure of human mitogen-activated protein kinase kinase 62 (mek6) activated mutant (s207d, t211d)
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290. ........300.........310.........320...
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Query Sequence  EIDPSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMSEEDFIEEAKVMMKLSH
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Template Sequence  EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRNSQEQKRLLMDLDISMRTVDC
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   47..50.........60.........70.........80.........90.........100......
 
   324.....330.........340.........350..... ....360.........370.........380.
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Query Sequence  SRLVQLYGVCIQQKPLYIVTEFMENGCLLDYL. . RERKGQLQKALLLSMCQDICEGMAYL
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Template Sequence  PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL
Template Known Secondary structure  TTB


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   110.........120.........130.........140.........150.........160.........
 
   382 .......390.........400.........410.........420.........430.........440
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Query Sequence  E. RSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHF
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Template Sequence  HSKLSVIHRDVKPSNVLINALGQVKMCDFAGCKP. . . . . . . . . . . . . . . . . YMAPERINP
Template Known Secondary structure  S






SGGG

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   170.........180.........190.........200... ......210..
 
   441. .......450.........460.........470. ........480.........490......
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Query Sequence  NK. . YSSKSDVWSFGVLMWEVFTEGKMPFENKS. . NLQVVEAISQGFRLYRPHLAPMTIY
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Template Sequence  ELNQYSVKSDIWSLGITMIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFV
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TT


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   228.230.........240.........250 .........260.........270.........280......
 
   497..500.........510........
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Query Sequence  RVMYSCWHESPKGRPTFAELLQ
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Template Sequence  DFTSQCLKKNSKERPTYPELMQ
Template Known Secondary structure  T
SSGGGS

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   289290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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