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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank261Aligned Residues242
% Identity23%Templatec3enmC_
PDB info PDB header:transferaseChain: C: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: the structure of the map2k mek6 reveals an autoinhibitory dimer
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280.........290. ........300... ......310........ .320.
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Query Sequence  IDPSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINE. . GSMSEEDFIEEAKVM. MKL
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Template Sequence  VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV
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TT

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S
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   48.50.........60.........70.........80.........90.........100.......
 
   322.......330.........340.........350....... ..360.........370.........
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Query Sequence  SHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRE. . RKGQLQKALLLSMCQDICEGMA
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Template Sequence  DCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE
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   108.110.........120.........130.........140.........150.........160.......
 
   380.... .....390.........400.........410.........420.........430........
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Query Sequence  YLERS. CYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVF
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Template Sequence  HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVKP. . . . . . . . . . YXAPERI
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SGGG
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   168.170.........180.........190.........200.........210 .......
 
   439440.. .......450.........460.........470.. .......480.........490.....
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Query Sequence  HFNK. YSSKSDVWSFGVLMWEVFTEGKMPFENKSN. . LQVVEAISQGFRLYRPHLAPMTI
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Template Sequence  NPELNQSVKSDIWSLGITXIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF
Template Known Secondary structure  S
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   226...230.........240......... 250.........260.........270.........280....
 
   496...500.........510........
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Query Sequence  YRVMYSCWHESPKGRPTFAELLQ
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Template Sequence  VDFTSQCLKKNSKERPTYPELXQ
Template Known Secondary structure  T
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   288.290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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