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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank211Aligned Residues226
% Identity26%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   262.......270.........280.........290. ........300.. .......310......
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Query Sequence  EKWEIDPSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAIN. . . . EGSMSEEDFIEEAK
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Template Sequence  RQWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE
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G..GGTTTTT

T
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   126...130 .........140.........150.........160.........170.........180...
 
   317..320.........330.........340.........350.........360.........370......
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Query Sequence  VMMKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICE
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Template Sequence  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL. SKFDEQRTATYITELAN
Template Known Secondary structure  T


TTB


SS


TT
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   184.....190.........200.........210.........220..... ....230.........240..
 
   377..380.........390.........400.........410.........420.........430......
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Query Sequence  GMAYLERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPE
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Template Sequence  ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . . . . . . . . . . . . . . . . DYLPPE
Template Known Secondary structure  TTT






GGG
TTS




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GG
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   243......250.........260.........270...... ...280..
 
   437..440.........450.........460.........470.........480.........490......
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Query Sequence  VFHFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIY
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Template Sequence  MI. . . . . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGAR
Template Known Secondary structure  GT......

.SS
TT

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TTS
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   300. ........310........ .320.........330........ .340.........350.
 
   497..500.........510........
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Query Sequence  RVMYSCWHESPKGRPTFAELLQ
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Template Sequence  DLISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   358.360.........370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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