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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank187Aligned Residues283
% Identity11%Templatec3e7eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitotic checkpoint serine/threonine-protein kinase bub1; PDBTitle: structure and substrate recruitment of the human spindle checkpoint2 kinase bub
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280.........290.....
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Query Sequence  AGLISRLRYPIGLLGSCLPATSGFSYEKWEIDPSELAFVKEIGSGQFGVVHLGEWRAHIP
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Template Sequence  SGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQNKQ. K
Template Known Secondary structure  T
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GGGSTT
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   752.......760.........770.........780.........790.........800......... 810
 
   296...300.........310....... ..320.........330.........340.........350....
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Query Sequence  VAIKAINEGSMSEEDFIEEAKV. MMKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDY
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Template Sequence  FVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNA
Template Known Secondary structure  SS

S
GGGGGGB


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S
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   818.820.........830.........840.........850.........860.........870.......
 
   355.. ..360.........370.........380.........390........ .400.....
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Query Sequence  LRE. . . . RKGQLQKALLLSMCQDICEGMAYLERSCYIHRDLAARNCLV. . . . . SSACVVK
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Template Sequence  INLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQSAGLA
Template Known Secondary structure  TSTT
S

TTT



SGGG
GGGT


TT
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   878.880.........890.........900.........910.........920.........930.......
 
   406...410....... ..420.........430.........440.........450.........460....
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Query Sequence  ISDFGMARYVLD. DEYISSSGAKFPVKWCPPEVFHFNKYSSKSDVWSFGVLMWEVFTEGK
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Template Sequence  LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF. GT
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TT
GGGS
TT

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TTS


TT

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   944.....950.........960.........970.........980.........990.........1000 ..
 
   465....470.........480.........490.........500.........510 .........520...
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Query Sequence  MPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSCWHESPKGR. PTFAELLQVLTEI
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Template Sequence  YMKVKNEG. . . . . GECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV
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   1003......1010 .........1020.........1030.........1040.........1050.......
 
   524.
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Query Sequence  AE
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Template Sequence  FQ
Template Known Secondary structure 
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   1058.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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