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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank131Aligned Residues239
% Identity33%Templatec3dtcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 9; PDBTitle: crystal structure of mixed-lineage kinase mlk1 complexed2 with compound 16
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290.........300.........310.........320...
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Query Sequence  WEIDPSELAFVKEIGSGQFGVVHLGEWRAHIPVAIKAINEGSMSEEDFIEEAKVMMKLSH
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Template Sequence  LEIDFAELTLEEIIGIGGFGKVYRAFWIGD. EVAVKAAT. . . . . IENVRQEAKLFAMLKH
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   137..140.........150.........160...... ...170.... .....180.........190
 
   324.....330.........340.........350.........360.........370.........380...
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Query Sequence  SRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLER
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Template Sequence  PNIIALRGVCLKEL. . CLVMEFARGGPLNRVL. . SGKRIPPDILVNWAVQIARGMNYLHD
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   201........210.... .....220.........230 .........240.........250......
 
   384. ....390.........400.........410.........420.........430.........440
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Query Sequence  SC. . . YIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHF
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Template Sequence  EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF. . . . . . . . GLGAYAWMAPEVIRA
Template Known Secondary structure  SSSS



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SGGGSS

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   259260.........270.........280.........290..... ....300.........310
 
   441........450.........460.........470.........480... ......490.........
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Query Sequence  NKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGF. RLYRPHLAPMTIYRVM
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Template Sequence  SMFSKGSDVWSYGVLLWELLT. GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM
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TTTTS
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   324.....330.........340.... .....350.........360.........370.........380..
 
   500.........510.........520.
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Query Sequence  YSCWHESPKGRPTFAELLQVLT
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Template Sequence  EDCWNPDPHSRPSFTNILDQLT
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   383......390.........400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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