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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank228Aligned Residues220
% Identity24%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300....... ..310.........320...
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMS. . . . EEDFIEEAKVMMKLSH
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN
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TTTTT

TTTT
STT


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   37..40.........50.........60.........70.........80.........90......
 
   324.....330.........340.........350.........360.........370.........380...
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Query Sequence  SRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLER
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Template Sequence  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR. KAVTEPEARYFMRQTIQGVQYLHN
Template Known Secondary structure  TTB


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   97..100.........110.........120.........130. ........140.........150.....
 
   384.....390.........400.........410.........420.........430.........440...
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Query Sequence  SCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKY
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Template Sequence  NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . . . . . . . . . . . . . . . . . . . . . . H
Template Known Secondary structure  TT




GGG
TT




TT

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   156...160.........170.........180....... .
 
   444.....450.........460.........470.........480.........490.........500...
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Query Sequence  SSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSCW
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Template Sequence  SFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRML
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T.SS
TT

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TTS
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   215....220.........230.. .......240.........250... ......260.........270..
 
   504.....510........
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Query Sequence  HESPKGRPTFAELLQ
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Template Sequence  HADPTLRPSVAELLT
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SSGGGS

T
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   273......280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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