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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank102Aligned Residues246
% Identity28%Templatec3comB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 4; PDBTitle: crystal structure of mst1 kinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290. ........300.........310.........320..
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Query Sequence  WEIDPSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMSEEDFIEEAKVMMKLS
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Template Sequence  TKQPEEVFDVLEKLG. . . . GSVYKAIHKETGQIVAIKQVPVES. DLQEIIKEISIMQQCD
Template Known Secondary structure  TS


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   23......30....... ..40.........50.........60. ........70.......
 
   323......330.........340.........350.........360.........370.........380..
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Query Sequence  HSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLE
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Template Sequence  SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH
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TTB

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   82.......90.........100.........110.........120.........130.........140.
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  RSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNK
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Template Sequence  FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDMAKRNVIGTPF. . . WMAPEVIQEIG
Template Known Secondary structure  TT



SGGG
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TT





SB


S
GG...G

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   142.......150.........160.........170.........180....... ..190........
 
   443......450.........460.........470.........480... ......490.........500
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Query Sequence  YSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGF. . RLYRPHLAPMTIYRVMY
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Template Sequence  YNCVADIWSLGITAIEMAE. GKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVK
Template Known Secondary structure  B
TT.SS
TTTTS
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SSGGGS
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   201........210......... 220.........230.........240.........250.........
 
   501........510........
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Query Sequence  SCWHESPKGRPTFAELLQ
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Template Sequence  QCLVKSPEQRATATQLLQ
Template Known Secondary structure 

S
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TT
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   260.........270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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