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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank195Aligned Residues214
% Identity25%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300..... ....310.........320...
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAINEGS. . . . MSEEDFIEEAKVMMKLSH
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Template Sequence  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH
Template Known Secondary structure  GG
SSTTT

TT
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   910.........20.........30.........40.........50.........60........
 
   324.....330.........340.........350.........360.........370.........380...
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Query Sequence  SRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLER
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Template Sequence  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS
Template Known Secondary structure  TTB


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   6970.........80.........90.........100.........110.........120........
 
   384.....390.........400.........410.........420.........430.........440...
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Query Sequence  SCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKY
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Template Sequence  HGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . L
Template Known Secondary structure  TT
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GGG
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   129130.........140.........150......... 160
 
   444.....450.........460.........470.........480.........490.........500...
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Query Sequence  SSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSCW
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Template Sequence  KLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . VVLADYEMPSFLSIEAKDLIHQLL
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   161........170........ .180........ .190.........200.........210..
 
   504.....510........
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Query Sequence  HESPKGRPTFAELLQ
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Template Sequence  RRNPADRLSLSSVLD
Template Known Secondary structure 
SSGGGS

TT
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   246...250.........260
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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