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Job DescriptionP42682
Confidence99.90%DateTue Jul 30 13:16:14 BST 2013
Rank349Aligned Residues112
% Identity29%Templatec2ysxA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:signaling inositol polyphosphate phosphatase PDBTitle: solution structure of the human ship sh2 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180 ...
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Query Sequence  RFGNEGLIPSNYVTENRLANLEIYEWYHKNITRNQTERLLRQEAKEGAFIVRDSRH. LGS
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Template Sequence  SSGSSGMVPC. . . . . . . . . . . . . . . WNHGNITRSKAEELLSRTGKDGSFLVRASESISRA
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   2.......10. ........20.........30.........40......
 
   184.....190.........200.........210.........220 .........230........
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Query Sequence  YTISVFTRARRHTQSSIKHYQIKKNDSGQWYITERHL. . . . . FPSVPELIQYHQYNAAGL
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Template Sequence  YALCVLYRNC. . . . . . VYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKENMGL
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   47..50...... ...60.........70.........80.........90.........100
 
   239240.........250.......
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Query Sequence  ISRLRYPIGLLGSCLPATS
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Template Sequence  VTHLQYPVPLEEEDTGDDP
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   101........110.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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