Job Description P42682 Confidence 99.52% Date Tue Jul 30 13:16:14 BST 2013 Rank 458 Aligned Residues 78 % Identity 18% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	E	W	Y	H	K	N	I	T	R	N	Q	T	E	R	L	L	R	Q	E	A	K	E	G	A	F	I	V	R	D	S	R	H	L	G	S	Y	T	I	S	V	F	T	R	A	R	R	H	T	Q	S	S	I	K	H	Y	Q	I	K
Query Conservation
Alig confidence								.														.	.																											.	.	.	.	.							.
Template Conservation								.														.	.																											.	.	.	.	.							.
Template Sequence		K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	.	.	.	.	.	F	V	H	M	K	I	.
Template Known Secondary structure		G	S	T	T			.														.	.	S	S									S	S	T	T										T	T		.	.	.	.	.							.
Template Predicted Secondary structure								.														.	.																											.	.	.	.	.							.
Template SS confidence
		791	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.						.	.	.	.	840	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	D	S	G	Q	W	Y	I	T	E	R	H	L	F	P	S	V	P	E	L	I	Q	Y	H	Q	Y	N
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R	P
Template Known Secondary structure		.				S	S					T	T				S	S								T
Template Predicted Secondary structure		.
Template SS confidence
			842	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D