Job Description P42682 Confidence 99.82% Date Tue Jul 30 13:16:14 BST 2013 Rank 389 Aligned Residues 126 % Identity 18% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		L	I	P	S	N	Y	V	T	E	N	R	L	A	N	L	E	I	Y	E	W	Y	H	K	N	I	T	R	N	Q	T	E	R	L	L	R	Q	E	A	K	E	G	A	F	I	V	R	D	S	R	H	.	L	G	S	Y	T	I	S	V	F
Query Conservation																																																				.
Alig confidence													.	.																									.													.
Template Conservation													.	.																									.
Template Sequence		M	V	Q	S	S	L	T	E	E	L	K	.	.	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	N	V	.	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R
Template Known Secondary structure													.	.						T		B			S										T	T	T	S	.		T	T								S	S	T	T		S
Template Predicted Secondary structure													.	.																									.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		T	R	A	R	R	H	T	Q	S	S	I	K	H	Y	Q	I	K	K	N	D	S	G	Q	W	Y	I	.	.	T	E	R	H	L	F	P	S	V	P	E	L	I	Q	Y	H	Q	Y	N	A	A	G	L	I	S	R	L	R	Y	P	I	G
Query Conservation																												.	.
Alig confidence			.	.	.	.	.	.																				.	.
Template Conservation			.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	H	G	K	T	L	H	T	R	I	E	H	S	N	G	R	F	S	F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L
Template Known Secondary structure			.	.	.	.	.	.	T	T											T	T					T	T			S				B	S	S															T						S			S
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		424							.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	S	C	L	P	A	T	S	G	F	S	Y	E	K	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	S	A	T	Y	P	V	R	L	T	N	P	V	S	R	F	M
Template Known Secondary structure		T	T											B			S	S
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D