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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank147Aligned Residues243
% Identity39%Templatec2qofA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase and juxtamembrane region, y596f mutant
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290. ........300... ......310........
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Query Sequence  EIDPSELAFVKEIGSGQFGVVHLGEWR. . . . AHIPVAIKAINE. . GSMSEEDFIEEAKVM
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM
Template Known Secondary structure  B

GGG
SSS
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TT

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   615....620.........630.........640.........650.........660.........670....
 
   319320.........330.........340.........350.........360.........370........
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Query Sequence  MKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGM
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Template Sequence  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM
Template Known Secondary structure  TT


TTB


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TT
BTTTT
S
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   675....680.........690.........700.........710.........720.........730....
 
   379380.........390.........400.........410.........420.........430........
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Query Sequence  AYLERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVF
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Template Sequence  KYLSDMGYVHRDLAARNILINSNLVCKVSDFPIR. . . . . . . . . . . . . . . . . . . WTSPEAI
Template Known Secondary structure  TT


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GGG
TT





GG...................GS
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   735....740.........750.........760........ .770.....
 
   439440.........450.........460.........470.........480.........490........
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Query Sequence  HFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRV
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Template Sequence  AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL
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TTS

TTTT

TT



TT
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   797..800.........810.........820.........830.........840.........850......
 
   499500.........510.........520......
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Query Sequence  MYSCWHESPKGRPTFAELLQVLTEIAET
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Template Sequence  MLDCWQKDRNNRPKFEQIVSILDKLIRN
Template Known Secondary structure  T
SSGGGS

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   857..860.........870.........880....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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