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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank91Aligned Residues245
% Identity23%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300. ........310.........320......
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAI. NEGSMSEEDFIEEAKVMMKLSHSRL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
S
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BTTB
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   26...30.........40.........50.........60.........70.........80.....
 
   327..330.........340.........350.........360.........370.........380......
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Query Sequence  VQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSCY
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERVVHK. RVFRESDAARIMKDVLSAVAYCHKLNV
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SS



SGGGGGTTT.SS

TT
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   86...90.........100.........110....... ..120.........130.........140....
 
   387..390........ .400.........410.........420.........430.........440...
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Query Sequence  IHRDLAARNCLV. . . SSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKY
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Template Sequence  AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV. . GTPYYVSPQVLEGL. Y
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SGGGSSSSTT




TT


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..S
GGGS
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   145....150.........160.........170.........180...... ...190.........200 .
 
   444.....450.........460.........470.........480........ .490.........500.
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Query Sequence  SSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRP. . HLAPMTIYRVMYS
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Template Sequence  GPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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TT.SS
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   202.......210......... 220.........230.........240.........250.........260
 
   502.......510........
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Query Sequence  CWHESPKGRPTFAELLQ
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

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   262.......270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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