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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank288Aligned Residues250
% Identity22%Templatec2ojiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1; PDBTitle: crystal structure of erk2 in complex with n-benzyl-4-(4-(3-2 chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290. ........300....... ..310.........320
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Query Sequence  WEIDPSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMS. . EEDFIEEAKVMMK
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Template Sequence  FDVG. PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR
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.SSTTTTTT

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   17..20 .........30.........40.........50.........60.........70.....
 
   321........330....... ..340.........350.........360.........370.....
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Query Sequence  LSHSRLVQLYGVCIQQK. . . . . PLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDIC
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Template Sequence  FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH. . . LSNDHICYFLYQIL
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TTB





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   76...80.........90.........100.........110........ .120.........130..
 
   376...380.........390.........400.........410.........420........ .430..
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Query Sequence  EGMAYLERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKF. . . PVKW
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Template Sequence  RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR
Template Known Secondary structure  TT




GGG
TT




SS


GGG
B

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S
GGG
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   133......140.........150.........160.........170.........180.........190..
 
   433......440.........450.........460.........470.........480........
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Query Sequence  CPPEVFHFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRP. . . .
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Template Sequence  APEIMLNSKGYTKSIDIWSVGCILAEMLS. NRPIFPGKHYLDQLNHILGILGSPSQEDLN
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   193......200.........210.........220. ........230.........240.........250.
 
   489490.........500.........510........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . HLAPMTIYRVMYSCWHESPKGRPTFAELLQ
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Template Sequence  CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA
Template Known Secondary structure  S


TS







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T
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   252.......260.........270.........280.........290.........300.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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