Return to main results Retrieve Phyre Job Id

Job DescriptionP42682
Confidence99.67%DateTue Jul 30 13:16:14 BST 2013
Rank415Aligned Residues85
% Identity22%Templatec2jxbA_
PDB info PDB header:signaling protein complexChain: A: PDB Molecule:t-cell surface glycoprotein cd3 epsilon chain, PDBTitle: structure of cd3epsilon-nck2 first sh3 domain complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110....
Predicted Secondary structure 

















































Query SS confidence 



























































Query Sequence  MGKTQSNRGGVQPSKRKPLPPLPQEPPDERIQVKALYDFLPREPGNLALKRAEEYLILER
Query Conservation                     
              



       


   

   

  
Alig confidence 



























































Template Conservation      

  
 
                       




 
    



  

 
 
   
Template Sequence  MKERPPPVPNPDYNSLKKGSLVKNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDD
Template Known Secondary structure 







S


S

SSS











SS




SSSB



TT
Template Predicted Secondary structure 









































Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   115....120.........130.........140
Predicted Secondary structure 















Query SS confidence 

























Query Sequence  CDPHWWKARDRFGNEGLIPSNYVTEN
Query Conservation      

      
  
 

   
   
Alig confidence  .
























Template Conservation  .   

      
  
 

 



  
Template Sequence  . SKTWWRVRNAANRTGYVPSNYVERK
Template Known Secondary structure  .
SS
TTS
GGGB


Template Predicted Secondary structure  .










Template SS confidence 

























   62.......70.........80......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D