Job Description P42682 Confidence 99.78% Date Tue Jul 30 13:16:14 BST 2013 Rank 401 Aligned Residues 101 % Identity 20% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	E	I	Y	E	W	Y	H	K	N	I	T	R	N	Q	T	E	R	L	L	R	Q	E	A	K	E	G	A	F	I	V	R	D	S	R	H	.	L	G	S	Y	T	I	S	V	F	T	R	A	R	R	H	T	Q	S	S	I	K	H	Y
Query Conservation																																						.
Alig confidence																									.													.														.	.	.	.	.	.
Template Conservation																									.																											.	.	.	.	.	.
Template Sequence		I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	.	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	.	.	.	.	.	.	S	L	H	A
Template Known Secondary structure						T	T															T	T		.		T	T								S	S	T	T		S								T	T		.	.	.	.	.	.
Template Predicted Secondary structure																									.																											.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.							330	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																		.	.	.	.																							.	.
Query SS confidence																		.	.	.	.																							.	.
Query Sequence		Q	I	K	K	N	D	S	G	Q	W	Y	I	T	E	R	H	.	.	.	.	L	F	P	S	V	P	E	L	I	Q	Y	H	Q	Y	N	A	A	G	L	I	S	R	.	.	L	R	Y	P	I	G	L	L	G	S	C	L
Query Conservation																		.	.	.	.																							.	.
Alig confidence						.												.	.	.	.																							.	.
Template Conservation						.
Template Sequence		R	I	E	Q	.	W	N	H	N	F	S	F	D	A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F	S
Template Known Secondary structure						.		T	T				S		T	T		T	T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure						.
Template SS confidence
		334	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D