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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank170Aligned Residues245
% Identity24%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300.. .......310.........320. .
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAIN. . . . EGSMSEEDFIEEAKVMMKL. S
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK
Template Known Secondary structure  TTTTTTSS
T
T
TT
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   340.........350.........360.........370.........380.........390.........
 
   323......330.........340.........350.........360.........370.........380..
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Query Sequence  HSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLE
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Template Sequence  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV. GRFKEPHAVFYAAEIAIGLFFLQ
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TTB

TT


S
BTT.SS

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   400.........410.........420.........430..... ....440.........450........
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  RSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNK
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Template Sequence  SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKFCGTP. . DYIAPEIIAYQP
Template Known Secondary structure  TT
B



SGGG
TTS



TT
B
S

TT

B


S
T..TT

TT

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   459460.........470.........480.........490.........500.... .....510......
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  YSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSC
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Template Sequence  YGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKEAVAICKGL
Template Known Secondary structure  B
T.SS
SS

SS
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TTS
S
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   518.520.........530...... ...540.........550...... ...560.........570.....
 
   503......510.. ......
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Query Sequence  WHESPKGRPT. . . . . FAELLQ
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Template Sequence  MTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  S
SSGGGSTT
STTT
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   576...580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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