Job Description P42682 Confidence 100.00% Date Tue Jul 30 13:16:14 BST 2013 Rank 152 Aligned Residues 235 % Identity 25% Template c2h6dA_ PDB info PDB header:signaling protein,transferase Chain: A: PDB Molecule:5'-amp-activated protein kinase catalytic subunit PDBTitle: protein kinase domain of the human 5'-amp-activated protein2 kinase catalytic subunit alpha-2 (ampk alpha-2 chain) Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																												.													.	.	.	.
Query SS confidence																												.													.	.	.	.
Query Sequence		I	D	P	S	E	L	A	F	V	K	E	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	.	A	H	I	P	V	A	I	K	A	I	N	E	.	.	.	.	G	S	M	S	E	E	D	F	I	E	E	A	K	V	M	M	K
Query Conservation																												.													.	.	.	.
Alig confidence																												.													.	.	.	.
Template Conservation
Template Sequence		V	K	I	G	H	Y	V	L	G	D	T	L	G	V	G	T	F	G	K	V	K	I	G	E	H	Q	L	T	G	H	K	V	A	V	K	I	L	N	R	Q	K	I	R	S	L	D	V	V	G	K	I	K	R	E	I	Q	N	L	K	L
Template Known Secondary structure					T	T											S	S									T	T	T																	T	T														T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	H	S	R	L	V	Q	L	Y	G	V	C	I	Q	Q	K	P	L	Y	I	V	T	E	F	M	E	N	G	C	L	L	D	Y	L	R	E	R	K	G	Q	L	Q	K	A	L	L	L	S	M	C	Q	D	I	C	E	G	M	A	Y
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		F	R	H	P	H	I	I	K	L	Y	Q	V	I	S	T	P	T	D	F	F	M	V	M	E	Y	V	S	G	G	E	L	F	D	Y	I	C	K	H	.	G	R	V	E	E	M	E	A	R	R	L	F	Q	Q	I	L	S	A	V	D	Y
Template Known Secondary structure					T	T	B										S	S											S		B									.		S
Template Predicted Secondary structure																																								.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	S	C	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	A	C	V	V	K	I	S	D	F	G	M	A	R	Y	V	L	D	D	E	Y	I	S	S	S	G	A	K	F	P	V	K	W	C	P	P	E	V	F	H	F
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	H	R	H	M	V	V	H	R	D	L	K	P	E	N	V	L	L	D	A	H	M	N	A	K	I	A	D	F	G	L	S	N	M	M	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	P	E	V	I	S	G
Template Known Secondary structure							S	S						G	G	G					T	T	S									G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	G	G	G	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																.	.	.	170	.	.	.	.
		441	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		N	K	.	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S	Q	G	F	R	L	Y	R	P	H	L	A	P	M	T	I	Y	R	V	M
Query Conservation				.
Alig confidence				.																				.																					.
Template Conservation																								.																					.
Template Sequence		R	L	Y	A	G	P	E	V	D	I	W	S	C	G	V	I	L	Y	A	L	L	C	.	G	T	L	P	F	D	D	E	H	V	P	T	L	F	K	K	I	R	G	G	.	V	F	Y	I	P	E	Y	L	N	R	S	V	A	T	L	L
Template Known Secondary structure		S																						.	S	S		S	S			S	S												.						T	T	S
Template Predicted Secondary structure																								.																					.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	C	W	H	E	S	P	K	G	R	P	T	F	A	E	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	H	M	L	Q	V	D	P	L	K	R	A	T	I	K	D	I	R	E
Template Known Secondary structure					T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D