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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank277Aligned Residues233
% Identity21%Templatec2dylA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity mitogen-activated protein PDBTitle: crystal structure of human mitogen-activated protein kinase2 kinase 7 activated mutant (s287d, t291d)
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270... ......280.........290. ........300.........310 .........320
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Query Sequence  IDPSELAF. VKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMSEED. . . FIEEAKVMMK
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Template Sequence  IGGQRYQAEINDLENLGEMQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS
Template Known Secondary structure  SSS

GGG

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   124.....130.........140.........150.........160.........170.........180...
 
   321........330.........340.........350.........360.........370.........380
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Query Sequence  LSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAY
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Template Sequence  HDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL
Template Known Secondary structure  TT
TTB


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   190.........200.........210.........220.........230.........240.........
 
   381........390.........400.........410.........420.........430.........440
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Query Sequence  LERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHF
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Template Sequence  KEKHGVIHRDVKPSNILLDERGQIKLCDFGIS. . . . . . . . . . . . . . . . . . . CAAYMAPER
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   250.........260.........270.........280. ........290
 
   441........450.........460.........470... ......480... ......490.......
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Query Sequence  NKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNL. QVVEAISQGF. . RLYRPHLAPMTIYR
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Template Sequence  IDYDIRADVWSLGISLVELAT. GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQS
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   305....310.........320..... ....330.........340.........350.........360...
 
   498.500.........510........
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Query Sequence  VMYSCWHESPKGRPTFAELLQ
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Template Sequence  FVKDCLTKDHRKRPKYNKLLE
Template Known Secondary structure  T
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   372.......380.........390..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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