Job Description P42682 Confidence 99.55% Date Tue Jul 30 13:16:14 BST 2013 Rank 434 Aligned Residues 75 % Identity 23% Template c2cubA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1 Resolution UNK

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	L	P	Q	E	P	P	D	E	R	I	Q	V	K	A	L	Y	D	F	L	P	R	E	P	G	N	L	A	L	K	R	A	E	E	Y	L	I	L	E	R	C	D	P	H	W	W	K	A	R	D	R	F	G	N	E	G	L	I	P
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		G	D	P	G	E	R	L	Y	D	L	N	M	P	A	Y	V	K	F	N	Y	M	A	E	R	E	D	E	L	S	L	I	K	G	T	K	V	I	V	M	E	K	C	S	D	G	W	W	R	G	S	.	Y	N	G	Q	V	G	W	F	P
Template Known Secondary structure			S	S	S			B										S	S						S	T	T	B					T	T										T	T	S						.		T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	Y	V	T	E	N	R	L	A	N	L	E	I	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	Y	V	T	E	E	G	D	S	P	L	G	D	H	V
Template Known Secondary structure		G	G	G									S	S	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D