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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank138Aligned Residues251
% Identity18%Templatec2c47D_
PDB info PDB header:transferaseChain: D: PDB Molecule:casein kinase 1 gamma 2 isoform; PDBTitle: structure of casein kinase 1 gamma 2
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.........300.........310.........320........
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWRAHIPVAIKAINEGSMSEEDFIEEAKVMMKLSHSRLVQ
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Template Sequence  PNFRVGKKIGELRLGKN. . . . LYTNEYVAIKLEP. IKSRAPQLHLEYRFYKQLSATEGVP
Template Known Secondary structure  GG


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   44.....50.........60 .........70... ......80.........90........
 
   329330.........340.........350.........360.........370.........380........
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Query Sequence  LYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSCYIH
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Template Sequence  QVYYFGPGKYNAMVLELL. GPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIY
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   104.....110.........120. ........130.........140.........150.........160..
 
   389390.........400.. .......410........ .420.........430........
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Query Sequence  RDLAARNCLVSSAC. . . . . VVKISDFGMARYVLDD. . . . . EYISSSGAKFPVKWCPPEVF
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Template Sequence  RDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPTKKHIPYREHKSLTGTARYMSINTH
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GGG

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TT
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   164.....170.........180.........190.........200.........210.........220...
 
   439440.........450.........460......... 470.........480........ .490.
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Query Sequence  HFNKYSSKSDVWSFGVLMWEVFTEGKMPFEN. . . KSNLQVVEAISQGFRLYRP. . . . HLA
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Template Sequence  LGKEQSRRDDLEALGHMFMYFLR. GSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENF
Template Known Secondary structure  TT



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   225....230.........240....... ..250.........260.........270.........280...
 
   492.......500.........510.........520......
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Query Sequence  PMTIYRVMYSCWHESPKGRPTFAELLQVLTEIAET
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Template Sequence  PEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR
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   284.....290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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