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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank116Aligned Residues247
% Identity26%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290. ........300.........310 .........320...
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Query Sequence  PSELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINEGSMSEED. . . FIEEAKVMMKLSH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


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   10.........20.........30.........40.........50.........60.........
 
   324.....330.........340.........350.........360.........370.........380...
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Query Sequence  SRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLER
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR. EFYSEADASHCIQQILESIAYCHS
Template Known Secondary structure  TTB


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S
BTT
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   70.........80.........90.........100.... .....110.........120........
 
   384.....390......... 400.........410.........420.........430.........440
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Query Sequence  SCYIHRDLAARNCLVS. . . SACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHF
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Template Sequence  NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG. . TPGYLSPEVLKK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

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S
S..
GGG

T
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   129130.........140.........150.........160.........170.... .....180......
 
   441........450.........460.........470.........480.... .....490.......
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Query Sequence  NKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFR. . . LYRPHLAPMTIYR
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Template Sequence  DPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS
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B
T.SS
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TTGGGGS
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   188.190.........200........ .210.........220.........230.........240......
 
   498.500.........510........
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Query Sequence  VMYSCWHESPKGRPTFAELLQ
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Template Sequence  LIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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