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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank23Aligned Residues251
% Identity23%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290.. .......300.. .......310........
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Query Sequence  WEIDPSELAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAIN. . . . EGSMSEEDFIEEAKVM
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Template Sequence  QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL
Template Known Secondary structure  S


GGGTTTTT

TT
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   179180.........190.........200.........210.........220.........230........
 
   319320.........330.........340.........350.........360.........370........
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Query Sequence  MKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGM
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Template Sequence  EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM. AGFPEARAVFYAAEICCGL
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   239240.........250.........260.........270........ .280.........290.......
 
   379380.........390.........400.........410.........420.........430........
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Query Sequence  AYLERSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVF
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Template Sequence  EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK. . GRVGTVGYMAPEVV
Template Known Secondary structure  TT



SGGG
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GGG

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   300.........310.........320.........330.........340... ......350.......
 
   439440.........450.........460.........470.........480.........490........
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Query Sequence  HFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRV
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Template Sequence  KNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQARSL
Template Known Secondary structure  TT
SS.SS
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   358.360.........370.........380 .........390.........400.........410......
 
   499500.........510 ........
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Query Sequence  MYSCWHESPKGR. . . . . PTFAELLQ
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Template Sequence  CSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
SSGGGSTTSSSSTT
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   420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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