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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank110Aligned Residues245
% Identity23%Templatec1xjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, theta type; PDBTitle: crystal structure of pkc-theta complexed with staurosporine2 at 2a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SELAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAINE. . . . GSMSEEDFIEEAKVMMK. LS
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Template Sequence  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE
Template Known Secondary structure  TT
SSSTTTTTT
TT
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   378.380.........390.........400.........410.........420.........430.......
 
   323......330.........340.........350.........360.........370.........380..
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Query Sequence  HSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLE
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Template Sequence  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC. HKFDLSRATFYAAEIILGLQFLH
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TTB


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   438.440.........450.........460.........470... ......480.........490......
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  RSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNK
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Template Sequence  SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNF. . CGTPDYIAPEILLGQK
Template Known Secondary structure  TT
B




GGG
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TT
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S
GGG

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   497..500.........510.........520.........530........ .540.........550....
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  YSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSC
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Template Sequence  YNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. NPFYPRWLEKEAKDLLVKL
Template Known Secondary structure  B
T.SS
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   556...560.........570.... .....580.........590.... .....600.........610...
 
   503......510... .....
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Query Sequence  WHESPKGRPTF. AELLQ
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Template Sequence  FVREPEKRLGVRGDIRQ
Template Known Secondary structure  S
SSGGGSBTTBS
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   614.....620.........630
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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