Job Description P42682 Confidence 99.66% Date Tue Jul 30 13:16:14 BST 2013 Rank 416 Aligned Residues 85 % Identity 18% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		G	K	T	Q	S	N	R	G	G	V	Q	P	S	K	R	K	P	L	P	P	L	P	Q	E	P	P	D	E	R	I	Q	V	K	A	L	Y	D	F	L	P	R	E	P	G	N	L	A	L	K	R	A	E	E	Y	L	I	L	.	.	.
Query Conservation																																																											.	.	.
Alig confidence																																																											.	.	.
Template Conservation
Template Sequence		V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q
Template Known Secondary structure																							S	S			T	T								S	S		B				S	T	T				B		S	S									S
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
				113	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.												.	.	.	.	.	.	.	.	.
Query SS confidence		.	.												.	.	.	.	.	.	.	.	.
Query Sequence		.	.	E	R	C	D	P	H	W	W	K	A	R	.	.	.	.	.	.	.	.	.	D	R	F	G	N	E	G	L	I	P	S	N	Y	V	T	E	N
Query Conservation		.	.												.	.	.	.	.	.	.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure			G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D