Job Description P42682 Confidence 100.00% Date Tue Jul 30 13:16:14 BST 2013 Rank 5 Aligned Residues 428 % Identity 39% Template c1k9aB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution Resolution 2.50 Å Model Dimensions (Å) X:70.174 Y:69.776 Z:52.849

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		Q	E	P	P	D	E	R	I	Q	V	K	A	L	Y	D	F	L	P	R	E	P	G	N	L	A	L	K	R	A	E	E	Y	L	I	L	E	.	R	C	D	P	H	W	W	K	A	R	D	R	F	G	N	E	G	L	I	P	S	N	Y
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		Q	A	S	W	P	S	G	T	E	C	I	A	K	Y	N	F	H	G	T	A	E	Q	D	L	P	F	C	K	G	D	V	L	T	I	V	A	V	T	K	D	P	N	W	Y	K	A	K	N	K	V	G	R	E	G	I	I	P	A	N	Y
Template Known Secondary structure			S				T	T						S	S		B			S	S	T	T	B			B		T	T										S	S	T	T							T	T	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		137	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure								.	.	.	.																																							.
Query SS confidence								.	.	.	.																																							.
Query Sequence		V	T	E	N	R	L	.	.	.	.	A	N	L	E	I	Y	E	W	Y	H	K	N	I	T	R	N	Q	T	E	R	L	L	R	Q	E	A	K	E	G	A	F	I	V	R	D	S	R	H	.	L	G	S	Y	T	I	S	V	F	T	R
Query Conservation								.	.	.	.																																							.
Alig confidence								.	.	.	.																										.													.											.
Template Conservation																																					.																								.
Template Sequence		V	Q	K	R	E	G	V	K	A	G	T	K	L	S	L	M	P	W	F	H	G	K	I	T	R	E	Q	A	E	R	L	L	Y	P	P	.	E	T	G	L	F	L	V	R	E	S	T	N	Y	P	G	D	Y	T	L	C	V	S	C	.
Template Known Secondary structure											S	S	S			S		T	T	B			S										T		S		.		T	T								S	S	S	T	T									.
Template Predicted Secondary structure																																					.																								.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	R	H	T	Q	S	S	I	K	H	Y	Q	I	K	K	N	D	S	G	Q	W	Y	I	T	E	R	H	L	F	P	S	V	P	E	L	I	Q	Y	H	Q	Y	N	A	A	G	L	I	S	R	L	R	Y	P	I	G	L	L	G	S
Query Conservation
Alig confidence		.	.	.	.	.												.
Template Conservation		.	.	.	.	.												.
Template Sequence		.	.	.	.	.	E	G	K	V	E	H	Y	R	I	M	Y	.	H	A	S	K	L	S	I	D	E	E	V	Y	F	E	N	L	M	Q	L	V	E	H	Y	T	T	D	A	D	G	L	C	T	R	L	I	K	P	K	V	M	E	G	T
Template Known Secondary structure		.	.	.	.	.	T	T										.		T	T				S	S	S	S	S		B	S	S													T	T	S	S	S				S	B				S	S
Template Predicted Secondary structure		.	.	.	.	.												.
Template SS confidence
							123	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	P	A	T	S	G	F	S	Y	E	K	W	E	I	D	P	S	E	L	A	F	V	K	E	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	A	H	I	P	V	A	I	K	A	I	N	E	G	S	M	S	E	E	D	F
Query Conservation
Alig confidence		.																																										.											.
Template Conservation		.																																										.											.
Template Sequence		.	V	A	A	Q	D	E	F	Y	R	S	G	W	A	L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	G	N	.	K	V	A	V	K	C	I	K	N	D	.	A	T	A	Q	A	F
Template Known Secondary structure		.										T	T		B			G	G	G											T	T									T	T		.								S	S		.	T	T	S
Template Predicted Secondary structure		.																																										.											.
Template SS confidence
			177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																					.
Query SS confidence																												.																					.
Query Sequence		I	E	E	A	K	V	M	M	K	L	S	H	S	R	L	V	Q	L	Y	G	V	C	I	Q	Q	K	.	P	L	Y	I	V	T	E	F	M	E	N	G	C	L	L	D	Y	L	R	E	.	R	K	G	Q	L	Q	K	A	L	L	L	S
Query Conservation																												.																					.
Alig confidence																												.																					.
Template Conservation
Template Sequence		L	A	E	A	S	V	M	T	Q	L	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K	G	G	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K
Template Known Secondary structure									T	T				T	T	B										S	S	S										T	T		B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	Q	D	I	C	E	G	M	A	Y	L	E	R	S	C	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	A	C	V	V	K	I	S	D	F	G	M	A	R	Y	V	L	D	D	E	Y	I	S	S	S	G	A	K	F	P
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	A	K	V	S	D	F	G	L	T	K	.	.	.	.	.	.	.	.	.	.	E	A	G	K	L	P
Template Known Secondary structure																T	T		B		S				G	G	G					T	T									T	T		B	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.											.	.	340	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	W	C	P	P	E	V	F	H	F	N	K	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S	Q	G	F	R	L	Y	R	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D
Template Known Secondary structure		T	T	T	S						T	T	T																				T	T	T			S	S	T	T	S		T	T	T						T	T	T							T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	M	T	I	Y	R	V	M	Y	S	C	W	H	E	S	P	K	G	R	P	T	F	A	E	L	L	Q	V	L	T	E	I	A	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	P	P	A	V	Y	D	V	M	K	N	C	W	H	L	D	A	A	T	R	P	T	F	L	Q	L	R	E	Q	L	E	H	I	R	T	H
Template Known Secondary structure		T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.