Job Description A1A535 Confidence 89.51% Date Wed Jul 10 14:03:03 BST 2013 Rank 118 Aligned Residues 297 % Identity 7% Template d2bpta1 SCOP info alpha-alpha superhelix ARM repeat Armadillo repeat Resolution 1.99

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		L	T	E	A	L	E	Q	I	K	V	I	S	S	S	L	D	Y	Q	T	N	N	N	D	Q	A	V	V	E	I	C	I	T	R	I	T	T	A	I	R	E	T	E	S	.	.	.	.	.	I	E	K	H	A	R	A	L	V	G	L	W
Query Conservation																																													.	.	.	.	.
Alig confidence																		.	.	.	.	.																							.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		Y	P	A	L	V	D	G	L	I	G	A	A	N	R	I	D	.	.	.	.	.	N	E	F	N	A	R	A	S	A	F	S	A	L	T	T	M	V	E	Y	A	T	D	T	V	A	E	T	S	A	S	I	S	T	F	V	M	D	K	L
Template Known Secondary structure														T		S		.	.	.	.	.		G	G	G																		G	G	G
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.						.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		D	S	C	L	E	H	N	L	R	P	A	G	K	D	E	D	T	P	H	A	K	I	A	S	D	I	M	S	C	I	.	.	.	.	.	L	Q	N	Y	N	R	T	P	V	M	V	L	A	V	P	I	A	V	K	F	L	H	R	G	S
Query Conservation																																.	.	.	.	.
Alig confidence																																.	.	.	.	.
Template Conservation
Template Sequence		G	Q	T	M	S	V	D	E	N	Q	L	T	L	E	D	A	Q	S	L	Q	E	L	Q	S	N	I	L	T	V	L	A	A	V	I	R	K	S	P	S	S	V	E	P	V	A	D	M	L	M	G	L	F	F	R	L	L	E	K	K	D
Template Known Secondary structure					T	T	S		G	G	G																												G	G	G	T	G	G	G														S	T	T
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
		142	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure										.																													.	.	.	.	.	.	.	.
Query SS confidence										.																													.	.	.	.	.	.	.	.
Query Sequence		K	E	L	C	R	N	M	S	.	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I	L	Q	G	.	.	.	.	.	.	.	.	N	A	M	L	L	R	V	L	P	A	V	Y	E	K	Q
Query Conservation										.																													.	.	.	.	.	.	.	.
Alig confidence										.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	F	I	E	D	D	V	F	Y	A	I	S	A	L	A	A	S	L	G	K	G	F	E	K	Y	L	E	T	F	S	P	Y	L	L	K	A	L	N	Q	V	D	S	P	V	S	I	T	A	V	G	F	I	A	D	I	S	N	S	L
Template Known Secondary structure		G	G	G	T																G	G	G	G																		T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	.	.	.	.	.	.	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																								.															.
Template Conservation																																														.															.
Template Sequence		E	E	D	F	R	R	Y	S	D	A	M	M	N	V	L	A	Q	M	I	S	N	P	N	A	R	R	E	L	K	P	A	V	L	S	V	F	G	D	I	A	S	N	I	G	.	A	D	F	I	P	Y	L	N	D	I	M	A	L	C	.
Template Known Secondary structure		G	G	G	G																		T	T			T	T																	G	.	G	G	G												.
Template Predicted Secondary structure																																														.															.
Template SS confidence
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	T	Y	N	D	I	I	L	N	I	L	I	E	I	A	G	H	E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G	H	V	D	E	E	R	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	V	A	A	Q	N	T	K	P	E	N	G	T	L	E	A	L	D	Y	Q	I	K	V	L	E	A	V	L	D	A	Y	V	G	I	V	A	G	L	H	D	K	P	E	A	L	F	P	Y	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					T				S	S	S	S																									T	T	T						G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	L	R	Y	L	V	S	Q	L	A	N	M	E	H	P	F	H	H	I	L	L	L	E	I	K	S	I	T	D	A	F	S	S	I	L	G	P	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	F	Q	F	I	A	Q	V	A	E	D	P	Q	L	Y	S	E	D	A	T	S	R	A	A	V	G	L	I	G	D	I	A	A	M	F	P	D	G	S
Template Known Secondary structure																		T	S																			T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D