Job Description A1A535 Confidence 22.18% Date Wed Jul 10 14:03:03 BST 2013 Rank 188 Aligned Residues 39 % Identity 23% Template d1l5ia_ SCOP info Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like DNA-binding domain of REP protein Resolution UNK

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Show / Hide Conservation and Alignment quality

		680	.	.	.	.	.	.	.	.	.								690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.		.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																				.
Query SS confidence												.	.	.	.	.	.	.																				.
Query Sequence		E	E	V	R	F	F	D	V	F	G	.	.	.	.	.	.	.	F	S	E	T	A	G	A	W	Q	C	F	M	C	N	N	P	E	K	A	.	T	V	V	N	Q	D	G	Q	P	L	I	E	G	K	L	K
Query Conservation												.	.	.	.	.	.	.																				.
Alig confidence												.	.	.	.	.	.	.						.	.	.	.	.	.									.
Template Conservation																								.	.	.	.	.	.
Template Sequence		T	N	Q	R	F	F	D	L	V	S	P	T	R	S	A	H	F	H	P	N	I	Q	.	.	.	.	.	.	G	A	K	S	S	S	D	V	K	S	Y	I	D	K	D	G	D	V	L	E	W	G	T	F	Q
Template Known Secondary structure				T	T	S	S					S	S	S	S									.	.	.	.	.	.			S		S	T										S	S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D