Job Description A1A535 Confidence 44.06% Date Wed Jul 10 14:03:03 BST 2013 Rank 155 Aligned Residues 158 % Identity 8% Template c4k92B_ PDB info PDB header:structural protein Chain: B: PDB Molecule:clip-associating protein 1; PDBTitle: a cryptic tog domain with a distinct architecture underlies clasp-2 dependent bipolar spindle formation Resolution 2.00 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		T	P	V	M	V	L	A	V	P	I	A	V	K	F	L	H	R	G	S	K	E	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I	L	Q	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	H	L	R	L	L	D	G	A	F	K	L	S	A	K	D	L	R	S	Q	V	V	R	E	A	C	I	T	L	G	H	L	S	S	V	L	G	N	K	F	D	H	G	A	E	A	I	X	P	T	I	F	N	L	I	P	N	S	A
Template Known Secondary structure							T	T									T		S																				G	G	G	G													T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
				177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	N	A	M	L	L	R	V	L	P	A	V	Y	E	K	Q	P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	R	K	D	V	E	V	V
Query Conservation		.	.
Alig confidence		.	.																						.	.
Template Conservation																									.	.
Template Sequence		K	I	X	A	T	S	G	V	V	A	V	R	L	I	I	R	H	T	H	I	P	R	L	.	.	I	P	V	I	T	S	N	C	T	S	K	S	V	A	V	R	R	R	C	F	E	F	L	D	L	L	L	Q	E	W	Q	T	H	S	L
Template Known Secondary structure																						T	T		.	.						G	G	G	G		S																			S
Template Predicted Secondary structure																									.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		235	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		Q	K	C	V	P	F	L	I	R	N	L	.	.	.	.	.	.	K	D	S	T	Y	N	D	I	I	L	N	I	L	I	E	I	A	G	H	E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	H	I	S	V	L	A	E	T	I	K	K	G	I	H	D	A	D	S	E	A	R	I	E	A	R	K	C	Y	W	G	F	H	S	H	F	S	R	E	A	E	H	L	Y	H	T	L	E	S	S	Y	Q	K
Template Known Secondary structure		T	T														T		S	S																												T	S
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D