Return to main results Retrieve Phyre Job Id

Job DescriptionA1A535
Confidence98.85%DateWed Jul 10 14:03:03 BST 2013
Rank17Aligned Residues109
% Identity24%Templatec4h8sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dcc-interacting protein 13-beta; PDBTitle: crystal structure of human appl2barph domain
Resolution3.50 Å
Model Dimensions (Å)X:39.583 Y:37.603 Z:38.672

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   702.......710.........720.........730.........740.........750.........760.
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  CNNPEKATVVNQDGQPLIEGKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDD
Query Conservation 
 




    




 








 



 


 








 
      

 
   
Alig confidence 


















































..






Template Conservation                     
 
            
      
    
    ..       
Template Sequence  TPDSDVAAPQINRNLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQP. . RGAVAGG
Template Known Secondary structure 
TTS
SSS




S
S


SSS

SS



..TT
SS

Template Predicted Secondary structure 


























..





Template SS confidence 



























































   263......270.........280.........290.........300.........310... ......320
 
   762.......770.........780.........790.... .....800.........810.......
Predicted Secondary structure 















..






Query SS confidence 
































. .






















Query Sequence  PPIELSKVQSVKAVAKKRRDRSLPRAFEIFTDS. . KTYVFKAKDEKNAEEWLQCINVA
Query Conservation    


 







   
  
 









 ..

 





 









 

Alig confidence 






.










....









..






















Template Conservation      
  .  
        ....   
 
          
 
 
      
   
   
Template Sequence  LIQDLDN. CSVMAVDCEDR. . . . RYCFQITTPNGKSGIILQAESRKENEEWICAINNI
Template Known Secondary structure 

B
SS
.


TT
....SS
TTSS


SSS
Template Predicted Secondary structure 


.






....






Template SS confidence 

























































   321...... ..330........ .340.........350.........360.........370...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D