 |
| Job Description | A1A535 | | Confidence | 98.46% | Date | Wed Jul 10 14:03:03 BST 2013 |
| Rank | 59 | Aligned Residues | 91 |
| % Identity | 23% | Template | c4gzuB_ |
| PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 2; |
PDBTitle: crystal strucure of the dh-ph-ph domain of farp2
|
| Resolution | 3.20 Å |
|
 |
|   |   |
715 | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | P | L | I | E | G | K | L | K | E | K | Q | V | R | W | K | F | I | K | R | W | K | T | R | Y | F | T | L | A | G | N | Q | L | L | F | Q | K | G | K | S | K | D | D | P | D | D | P | P | I | E | L | S | K | V | Q | S | V | K | A |
| Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|   |   |   | . | . | . | . | . |   |   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
| Template Sequence |   |
V | E | N | Q | L | S | G | Y | L | L | R | K | F | K | . |
. |
. |
. |
. |
N | G | W | Q | K | L | W | V | V | F | T | N | F | C | L | F | F | . |
. |
. |
. |
Y | K | T | H | Q | D | D | Y | P | L | A | S | L | P | L | L | G | Y | S | V |
| Template Known Secondary structure |   |
S | T | T |
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  | T | T |  |  |  |  | . | . | . | . |  | S | S | T | T |
| S | S |
| S |
|  |  |  |
| T | T |
|  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
929 | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | |
|
|
|
960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
775 | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | A | K | K | R | R | D | R | S | L | P | R | A | F | E | I | F | T | D | S | K | T | Y | V | F | K | A | K | D | E | K | N | A | E | E | W | L | Q | C | I | N | V | A |
| Query Conservation |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
| Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
| Template Sequence |   |
. |
. |
. |
S | L | D | S | I | H | K | D | Y | V | F | K | L | Q | F | K | S | H | V | Y | F | F | R | A | E | S | K | Y | T | F | E | R | W | M | D | V | I | K | R | A |
| Template Known Secondary structure |   |
. | . | . |  |
|
|
| G | G | G | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| Template Predicted Secondary structure |   |
. | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
982 | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|