Job Description A1A535 Confidence 45.48% Date Wed Jul 10 14:03:03 BST 2013 Rank 154 Aligned Residues 252 % Identity 15% Template c4fgvA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:chromosome region maintenance 1 (crm1) or exportin 1 PDBTitle: crystal structure of free crm1 (crystal form 1) Resolution 2.94 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	L	E	Q	I	K	V	I	S	S	S	L	D	Y	Q	T	N	N	N	D	Q	A	V	V	E	I	C	I	T	R	I	T	T	A	I	R	E	T	E	S	I	E	K	H	A	R	A	L	V	G	L	W	D	S	C	L	E	H
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		V	D	M	E	Q	I	M	T	E	K	L	A	R	Q	V	D	G	S	E	W	S	W	H	N	C	N	V	L	C	.	.	W	A	I	G	S	I	S	M	A	M	N	E	E	T	E	K	R	F	L	V	T	V	I	K	D	L	L	G	L
Template Known Secondary structure																	T	S				S									.	.						T	T	T	S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		N	L	R	P	A	G	K	D	E	D	T	P	H	A	K	I	A	S	D	I	M	S	C	I	L	Q	N	Y	.	.	.	.	N	R	T	P	V	M	V	L	A	V	P	I	A	V	K	F	L	H	R	G	S	K	E	L	C	R	N	M
Query Conservation																														.	.	.	.
Alig confidence										.	.	.																		.	.	.	.
Template Conservation										.	.	.
Template Sequence		T	E	M	K	R	G	K	D	.	.	.	N	K	A	V	V	A	S	N	I	M	Y	I	V	G	Q	Y	P	R	F	L	K	A	H	W	K	F	L	K	T	V	V	N	K	L	F	E	F	M	H	E	S	H	E	G	V	Q	D	M	A
Template Known Secondary structure					S		S			.	.	.																						T																T	T	S	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	.	.	.	.	G	I	I	K	S	I	L	Q	G	N	A	M	L	L	R	V	L	P	A	V	Y	E	K	Q	P	Q	P	I	N	R	H	L	A	E	L	L
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.										.	.	.
Template Conservation																																			.	.	.
Template Sequence		C	D	T	F	I	K	I	A	K	Q	C	R	R	H	F	V	A	L	Q	P	S	E	N	E	P	F	I	E	E	I	I	R	N	.	.	.	I	G	K	I	T	C	D	L	T	P	Q	Q	V	H	T	F	Y	E	A	C	G	Y	M	V
Template Known Secondary structure												T	T					S			T	T		S	S									T	.	.	.					T	T	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.				.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K	D	S	T	Y	N	D	I	I	L	N	I	L	I	E	I	A	G	H
Query Conservation
Alig confidence						.	.																					.
Template Conservation						.	.																					.
Template Sequence		S	A	Q	G	.	.	N	R	N	Q	Q	E	R	L	L	A	E	L	M	A	I	P	N	A	A	W	.	D	E	I	I	K	A	A	T	M	N	P	G	I	L	H	E	P	D	T	I	K	I	I	G	N	I	M	K	T	N	V	S	A
Template Known Secondary structure			T			.	.													T								.											G	G	G	G	G	S
Template Predicted Secondary structure						.	.																					.
Template SS confidence
		639	640	.	.			.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.		.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q	F	P	Y	L	T	G	Q	M	A	R	I	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	S	S	I	G	P	Y	F	F	P	Q	I	G	R	L	Y	N	D	M	L	Q	M	Y	A	A	T	S	Q	L	I	S
Template Known Secondary structure						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D