Job Description A1A535 Confidence 29.92% Date Wed Jul 10 14:03:03 BST 2013 Rank 172 Aligned Residues 287 % Identity 13% Template c3zjyE_ PDB info PDB header:translation Chain: E: PDB Molecule:importin-13; PDBTitle: crystal structure of importin 13 - rangtp - eif1a complex Resolution 3.60 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	E	D	S	L	T	E	A	L	E	Q	I	K	V	I	S	S	S	L	D	Y	Q	T	N	N	N	D	Q	A	V	V	E	I	C	I	T	R	I	T	T	A	I	R	E	T	E	S	I	E	K	H	A	R	A	L	V	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	L	I	P	L	V	L	G	L	Q	E	Q	L	R	Q	A	V	Q	N	G	D	M	E	T	S	H	G	I	C	R	I	A	V	A	L	G	E	N	H	S	R	A	L	L	D	Q	V	E	H	W	Q	S	F	L	A	L	V	N	M
Template Known Secondary structure									T	T	T											T																											G	G	G
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.														.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	D	S	C	L	E	H	N	L	R	P	A	G	K	D	E	D	T	P	H	A	K	I	A	S	D	I	M	S	C	I	L	Q	N	Y	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	V	M	V	L	A	V	P	I
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		I	M	F	C	T	G	I	P	G	.	.	.	H	Y	P	V	N	E	T	T	S	S	L	T	L	T	F	W	Y	T	L	Q	D	D	I	L	S	F	E	A	E	K	Q	A	V	Y	Q	Q	V	Y	R	P	V	Y	F	Q	L	V	D	V
Template Known Secondary structure							T		S	S	.	.	.		T	T	T	T		S																	T	T	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.																.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	K	F	L	H	R	G	S	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I	L	Q	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	H	K	A	Q	F	P	S	D	E	E	Y	G	F	W	S	S	D	E	K	E	Q	F	R	I	Y	R	V	D	I	S	D	T	L	M	Y	V	Y	E	M	L	G	A	E	L	L	S	N	L	Y	D	K	L	G	R	L	L	T	S
Template Known Secondary structure						S	S									T	S																											T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		178	.								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																																															.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.																																															.	.	.	.	.
Query Sequence		N	A	.	.	.	.	.	.	.	M	L	L	R	V	L	P	A	V	Y	E	K	Q	P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.																																															.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation
Template Sequence		E	P	Y	S	W	Q	H	T	E	A	L	L	Y	G	F	Q	S	I	A	E	T	I	D	V	N	Y	S	D	V	V	P	G	L	I	G	L	I	P	R	I	S	I	S	N	V	Q	L	A	D	T	V	M	F	T	I	G	A	L	S	E
Template Known Secondary structure																					T	T			T	T	S		S	S								G	G	G	S			S	S														T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
			226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure		.																																																										.	.
Query SS confidence		.																																																										.	.
Query Sequence		.	A	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K	D	S	T	Y	N	D	I	I	L	N	I	L	I	E	I	A	G	H	E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q	.	.
Query Conservation		.																																																										.	.
Alig confidence		.						.																																																				.	.
Template Conservation								.
Template Sequence		W	L	A	D	H	P	.	V	M	I	N	S	V	L	P	L	V	L	H	A	L	G	N	P	E	L	S	V	S	S	V	S	T	L	K	K	I	C	R	E	C	K	Y	D	L	P	P	Y	A	A	N	I	V	A	V	S	Q	D	V	L
Template Known Secondary structure							T	.	T	T												T	T	S	G	G	G															S		T	T		T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		519	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
								283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G	H	V	D	E	E	R	A	R	S	C	L	R	Y	L	V	S	Q	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	Q	I	H	K	T	S	Q	C	M	W	L	M	Q	A	L	G	F	L	L	S	A	L	Q	V	E	E	I	L	K	N	L	H	S	L	I	S	P	Y
Template Known Secondary structure			T	T		S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D