Job Description A1A535 Confidence 94.99% Date Wed Jul 10 14:03:03 BST 2013 Rank 107 Aligned Residues 327 % Identity 13% Template c3w3zA_ PDB info PDB header:protein transport/nuclear protein Chain: A: PDB Molecule:importin subunit beta-3; PDBTitle: crystal structure of kap121p bound to rangtp Resolution 2.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	L	F	S	L	D	D	A	E	I	E	D	S	L	T	E	A	L	E	Q	I	K	V	I	S	S	S	L	D	Y	Q	T	N	N	N	D	Q	A	V	V	E	I	C	I	T	R	I	T	T	A	I	R	E	T	E	S	I	E	K
Query Conservation
Alig confidence																																.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		I	E	L	V	E	L	A	P	K	L	F	K	D	X	F	D	Q	I	I	Q	F	T	D	X	V	I	K	N	K	D	.	.	.	.	.	L	E	P	P	A	R	T	T	A	L	E	L	L	T	V	F	S	E	N	A	P	Q	X	C	K
Template Known Secondary structure						T	T		G	G	G	G	G	G	G															T	T	.	.	.	.	.	S
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	R	A	L	V	G	L	W	D	S	C	L	E	H	N	L	R	P	A	G	K	D	E	D	T	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	I	A	S	D	I	M	S	C	I	L	Q	N	Y	N	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	Q	N	Y	G	Q	T	L	V	X	V	T	L	I	X	X	T	E	V	S	I	D	D	D	D	A	A	E	W	I	E	S	D	D	T	D	D	E	E	E	V	T	Y	D	H	A	R	Q	A	L	D	R	V	A	L	K	L	G	G
Template Known Secondary structure		T																	T			S	T	T		T	T						S	S		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		T	P	V	M	V	L	A	V	P	I	A	V	K	F	L	H	R	G	S	K	E	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I	L	Q	G	N	A	M	.	.
Query Conservation																																																												.	.
Alig confidence																																																												.	.
Template Conservation
Template Sequence		E	Y	L	A	A	P	L	F	Q	Y	L	Q	Q	X	I	T	S	T	E	W	R	E	R	F	A	A	X	X	A	L	S	S	A	A	E	G	C	A	D	V	L	I	G	E	I	P	K	I	L	D	X	V	I	P	L	I	N	D	P	H
Template Known Secondary structure																	T		S																T	T	T	T					T	S	S									G	G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
								181	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.												.																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.												.																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	L	L	R	V	L	P	A	V	Y	E	K	.	Q	P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	.	.	.	.	.	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	R
Query Conservation		.	.	.	.	.	.												.																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.												.																	.	.	.	.	.
Template Conservation
Template Sequence		P	R	V	Q	Y	G	C	C	N	V	L	G	Q	I	S	T	D	F	S	P	F	I	Q	R	T	A	H	D	R	I	L	P	A	L	I	S	K	L	T	S	E	C	T	S	R	V	Q	T	H	A	A	A	A	L	V	N	F	S	E	F
Template Known Secondary structure																			T	T	T																		T	S	T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K	.	.	.	.	.	.	D	S	T	Y	N	D	I	I	L	N	I	L	I	E	I	A	G	H	E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	K	D	I	L	E	P	Y	L	D	S	L	L	T	N	L	L	V	L	L	Q	S	N	K	L	Y	V	Q	E	Q	A	L	T	T	I	A	F	I	A	E	A	A	K	N	K	F	I	K	Y	Y	D	T	L	X	P	L	L	L	N
Template Known Secondary structure								G	G	G													T		S	S															T	T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
					283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure		.	.	.																				.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.
Query Sequence		.	.	.	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G	H	V	D	.	.	.	.	.	E	E	R	A	R	S	C	L	R	Y	L	V	S	Q	L	A	N	M	E	H	P	F	H	H	I	L	L	L	E	I	K	S	I
Query Conservation		.	.	.																				.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.												.
Template Conservation																																								.
Template Sequence		V	L	K	N	S	V	L	K	G	K	C	X	E	C	A	T	L	I	G	F	A	V	G	K	E	K	F	H	E	H	S	Q	E	L	I	S	I	L	.	V	A	L	Q	N	S	D	D	A	L	R	S	Y	L	E	Q	S	W	S	R	I
Template Known Secondary structure																							S																	.					T
Template Predicted Secondary structure																																								.
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	F	S	S	I	L	G	P	H	S	R	D	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	R	I	L	G	D	D	F	V	P	L	L	P	I	V	I
Template Known Secondary structure						G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D