Job Description A1A535 Confidence 92.04% Date Wed Jul 10 14:03:03 BST 2013 Rank 113 Aligned Residues 225 % Identity 20% Template c3v6aA_ PDB info PDB header:apoptosis inhibitor Chain: A: PDB Molecule:apoptosis inhibitor 5; PDBTitle: helical repeat structure of apoptosis inhibitor 5 reveals protein-2 protein interaction modules Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	E	Q	I	K	V	I	S	S	S	L	D	Y	Q	T	N	N	N	D	Q	A	V	V	E	I	C	I	T	R	I	T	T	A	I	R	E	T	E	S	I	E	K	H	A	R	A	L	V	G	L	W	D	S	C	L	E	H	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Sequence		S	A	I	N	A	Q	L	D	L	C	E	D	E	D	.	.	.	.	.	.	.	.	V	S	I	R	R	Q	A	I	K	E	L	P	Q	F	A	T	G	E	N	L	P	R	V	A	D	I	L	T	Q	L	L	Q	T	.	.	.	.	.
Template Known Secondary structure												T		S	S	.	.	.	.	.	.	.	.											G	G	G	G			T	T													T	T		.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																							.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence															.																							.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		L	R	P	A	G	K	D	E	D	T	P	H	A	.	K	I	A	S	D	I	M	S	C	I	L	Q	N	Y	N	R	T	P	V	M	V	L	.	.	.	.	.	.	.	.	.	.	A	V	P	I	A	V	K	F	L	H	R	.	.	.
Query Conservation															.																							.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.						.																							.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	D	S	A	E	F	N	L	V	N	N	A	L	L	S	I	F	K	M	D	A	K	G	T	L	G	G	L	F	S	Q	I	L	Q	G	E	D	I	V	R	E	R	A	I	K	F	L	S	T	K	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.																																			S																G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				140	.	.	.	.	.	.	.	.	.	150	.	.																																							.	.	.	.	.	.	.
Predicted Secondary structure		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	S	K	E	L	C	R	N	M	S	N	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	A	A	I	T	K
Query Conservation		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	P	D	E	V	L	T	K	E	V	E	E	L	I	L	T	E	S	K	K	V	L	E	D	V	T	G	E	E	F	V	L	F	M	K	I	L	S	G	L	K	S	L	Q	T	V	S	G	R	Q	Q	L	V	E	L	V	A	E	Q
Template Known Secondary structure		G	S		T	T	T	S																	T	T															T	S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure									.	.	.																											.	.
Query SS confidence									.	.	.																											.	.
Query Sequence		A	D	L	L	A	D	H	.	.	.	T	E	G	I	I	K	S	I	L	Q	G	N	A	M	L	L	R	V	L	P	A	V	Y	E	K	Q	.	.	P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	S	Q	L	E	Q	T	E
Query Conservation									.	.	.																											.	.
Alig confidence									.	.	.												.	.	.													.	.
Template Conservation																							.	.	.
Template Sequence		A	D	L	E	Q	T	F	N	P	S	D	P	D	C	V	D	R	L	L	Q	C	.	.	.	T	R	Q	A	V	P	L	F	S	Q	N	V	H	S	T	R	F	V	T	Y	F	C	E	Q	V	L	P	N	L	G	T	L	T	T	P	G
Template Known Secondary structure			T	T	T	S				S	S	S											.	.	.					G	G	G		B	T	T	B													T	T	T	T		S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
					215	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.	.	.													.	.	.	.	.																					.	.	.	.
Query SS confidence		.	.	.													.	.	.	.	.																					.	.	.	.
Query Sequence		.	.	.	Q	Y	H	L	L	R	L	L	H	V	A	A	.	.	.	.	.	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K	.	.	.	.	D	S	T	Y	N	D	I	I	L	N	I	L	I	E	I	A
Query Conservation		.	.	.													.	.	.	.	.																					.	.	.	.
Alig confidence		.	.	.													.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		L	D	I	Q	L	E	V	L	K	L	L	A	E	M	S	S	F	C	G	D	M	E	K	L	E	T	N	L	R	K	L	F	D	K	L	L	E	Y	M	P	L	P	K	L	Q	F	S	Y	V	E	C	L	L	Y	S	F	H	Q	L	G
Template Known Secondary structure																	T	T					T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	L	P	D	F	L	T	A	K	A	E	K	L	K	D	F	K	I	R
Template Known Secondary structure		T	T		T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D