Job Description A1A535 Confidence 98.02% Date Wed Jul 10 14:03:03 BST 2013 Rank 81 Aligned Residues 103 % Identity 19% Template c3tcaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member PDBTitle: crystal structure of the ras-associating and pleckstrin-homology2 domains of riam Resolution 2.35 Å

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		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.							.	.	.	.	.	.	770
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		P	L	I	E	G	K	L	K	E	K	Q	V	R	W	K	F	I	K	R	W	K	T	R	Y	F	T	L	A	G	N	Q	L	L	F	Q	K	G	K	S	K	D	D	P	D	D	P	P	.	.	.	.	.	.	I	E	L	S	K	V	Q
Query Conservation																																																	.	.	.	.	.	.
Alig confidence															.	.	.																			.	.	.	.										.	.	.	.	.	.
Template Conservation															.	.	.																			.	.	.	.
Template Sequence		P	E	L	E	G	A	L	Y	L	K	E	D	G	.	.	.	K	K	S	W	K	R	R	Y	F	L	L	R	A	S	G	I	Y	Y	.	.	.	.	V	P	K	G	K	T	K	T	S	R	D	L	A	C	F	I	Q	F	E	N	V	N
Template Known Secondary structure													T	T	.	.	.	S	S											S	S					.	.	.	.			T	T			S	S	T	T	T							G	G	G
Template Predicted Secondary structure															.	.	.																			.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		771	.	.	.	.	.	.	.	.	780	.	.		.	.	.	.	.	.	.	790	.	.	.	.	.	.							.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
Predicted Secondary structure														.															.	.	.	.	.	.
Query SS confidence														.															.	.	.	.	.	.
Query Sequence		S	V	K	A	V	A	K	K	R	R	D	R	.	S	L	P	R	A	F	E	I	F	T	D	S	K	T	.	.	.	.	.	.	Y	V	F	K	A	K	D	E	K	N	A	E	E	W	L	Q	C	I	N	V	A	L	A	Q	A	K	E
Query Conservation														.															.	.	.	.	.	.
Alig confidence														.															.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	Y	G	I	Q	C	K	M	K	Y	K	A	P	T	D	H	C	F	V	L	K	H	P	Q	I	Q	K	E	S	Q	Y	I	K	Y	L	C	C	D	D	A	R	T	L	S	Q	W	V	M	G	I	R	I	A	K	Y	G	K	T	L
Template Known Secondary structure							S								S	S	S								T	T			S			T	T	S						S	S																	T
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		824	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		427	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D