Job Description A1A535 Confidence 23.02% Date Wed Jul 10 14:03:03 BST 2013 Rank 185 Aligned Residues 205 % Identity 16% Template c3s4wB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:fanconi anemia group d2 protein homolog; PDBTitle: structure of the fanci-fancd2 complex Resolution 3.41 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	L	Q	N	Y	N	R	T	P	V	M	V	L	A	V	P	I	A	V	K	.	F	L	H	R	G	S	K	E	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I
Query Conservation																						.
Alig confidence																						.						.	.	.	.	.																											.
Template Conservation																												.	.	.	.	.																											.
Template Sequence		L	L	I	I	Y	S	T	S	T	Q	T	K	K	G	V	E	K	L	L	R	N	K	I	Q	S	D	.	.	.	.	.	C	I	Q	E	Q	L	L	D	S	A	F	S	T	H	Y	L	V	L	K	D	I	C	P	S	I	L	.	L	L
Template Known Secondary structure																									T	T	T	.	.	.	.	.		S																	T	T	S						.
Template Predicted Secondary structure																												.	.	.	.	.																											.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.						.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.
		175	.	.	.	.	180	.	.	.	.	.	.													.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		L	Q	G	N	A	M	L	L	R	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	A	V	Y	E	K	Q	P	Q	P	I	N	R	.	H	L	A	E	L	L	A	L	M	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence					.	.	.							.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation					.	.	.
Template Sequence		A	Q	T	.	.	.	L	F	H	S	Q	D	Q	R	I	I	L	F	G	S	L	L	Y	K	Y	A	F	K	F	F	D	T	Y	C	Q	Q	E	V	V	G	A	L	V	T	H	V	C	S	G	T	E	A	E	V	D	T	A	L	D	V
Template Known Secondary structure					.	.	.			T	S	S	S																	S	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		437	.	.				440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.											.
Query SS confidence																																	.	.	.	.	.											.
Query Sequence		L	H	V	A	A	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K	D	S	T	Y	N	D	.	.	.	.	.	I	I	L	N	I	L	I	E	I	A	.	G	H	E	P	L	A	L	N	S	F	L	P	M
Query Conservation																																	.	.	.	.	.											.
Alig confidence											.																						.	.	.	.	.											.
Template Conservation											.
Template Sequence		L	L	E	L	I	V	L	N	A	.	S	A	M	R	L	N	A	A	F	V	K	G	I	L	D	Y	L	E	N	M	S	P	Q	Q	I	R	K	I	F	C	I	L	S	T	L	A	F	S	Q	Q	P	G	T	S	N	H	I	Q	D	D
Template Known Secondary structure											.						T						G	G	G	G	G	G	G	G																						S	S
Template Predicted Secondary structure											.
Template SS confidence
		494	.	.	.	.	.	500	.	.		.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	I	A	E	Q	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G	H	V	D	E	E	R	A	R	S	C	L	R	Y	L	V	S	Q	L	A	N	M	E	H	P	F	H	H	I	L	L	L	E	I	K	S	I	T
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	L	V	I	R	K	Q	L	S	S	T	V	F	K	Y	K	L	I	G	I	I	G	A	V	T	.	.	.	.	.	.	.	.	.	.	M	A	G	I	M	A	E	S	E	Q	R	T	Q	V	T	S	L	L	Q	L	V	H	S	C
Template Known Secondary structure											T		S	S														.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.											.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
		336	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	H	S	P
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		619	620	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D