Return to main results Retrieve Phyre Job Id

Job DescriptionA1A535
Confidence98.18%DateWed Jul 10 14:03:03 BST 2013
Rank73Aligned Residues107
% Identity21%Templatec3hk0B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:growth factor receptor-bound protein 10; PDBTitle: crystal structure of the ra and ph domains of grb10
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   710.........720.........730.........740.........750.........760.........
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  VVNQDGQPLIEGKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDPPIELSKV
Query Conservation     




 








 



 


 








 
      

 
     


 

Alig confidence 



















...





















.










...
Template Conservation         
   
 
  
   ... 
 








   


    .        
  ...
Template Sequence  FLNSSSSPEIQGFLHVKELG. . . KKSWKKLYVCLRRSGLYCSLQL. LADLEDSNIFS. . .
Template Known Secondary structure 
TT



SS...SS
TT

.

TT...
Template Predicted Secondary structure 










...








.






...
Template SS confidence 



























































   226...230.........240..... ....250.........260....... ..270........
 
   770.........780.........790 .........800.........810.........820...
Predicted Secondary structure 











......








Query SS confidence 




















. . . . . .
































Query Sequence  QSVKAVAKKRRDRSLPRAFEI. . . . . . FTDSKTYVFKAKDEKNAEEWLQCINVALAQAKE
Query Conservation 





   
  
 






......


 

 





 









 





 
Alig confidence  ...

















......
































Template Conservation  ...          
    
 

             
 

 
     

 


 

 
  
Template Sequence  . . . LIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYGMLL
Template Known Secondary structure  ...SSTTTTT

SSS
TT
SS

TT


SST
Template Predicted Secondary structure  ...























Template SS confidence 



























































   289290.........300.........310.........320.........330.........340.....
 
   824..
Predicted Secondary structure 

Query SS confidence 


Query Sequence  RES
Query Conservation 

 
Alig confidence 


Template Conservation     
Template Sequence  YQN
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   346..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D