 |
| Job Description | A1A535 | | Confidence | 86.41% | Date | Wed Jul 10 14:03:03 BST 2013 |
| Rank | 126 | Aligned Residues | 83 |
| % Identity | 23% | Template | c2z0qA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 3; |
PDBTitle: crystal structure of dh-ph domain of rhogef3(xpln)
|
| Resolution | 1.79 Å |
|
 |
|   |   |
734 | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | |
|
|
|
|
| Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
| Query Sequence |   |
K | R | W | K | T | R | Y | F | T | L | A | G | N | Q | L | L | F | Q | K | G | K | S | K | D | . |
. |
. |
. |
. |
D | P | D | D | P | P | I | E | L | S | K | V | Q | S | V | K | A | V | A | K | K | R | R | D | R | S | . |
. |
. |
. |
. |
| Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   | . | . | . | . | . |
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|   | . | . | . | . | . |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
N | R | G | V | K | L | H | V | F | L | F | Q | E | V | L | V | I | T | R | A | V | T | H | N | E | Q | L | C | Y | Q | L | Y | R | Q | P | I | P | V | K | D | L | T | . |
L | E | D | L | Q | D | G | E | V | R | L | G | G | S | L | A | F |
| Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S |
|
|  |  | G | G | G |
|  | . |  |  |  |
|
| T | T | T | S |
|
|
| S |
|
|
|
|
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | |
. | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
|   |
|   |   |
|
|
|
|
|
784 | . | . | . | . | . | 790 | . | |
|
|
|
. | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|  |  |  |  |  | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
. |
. |
. |
. |
. |
L | P | R | A | F | E | I | F | . |
. |
. |
. |
T | D | S | K | T | Y | V | F | K | A | K | D | E | K | N | A | E | E | W | L | Q | C | I | N | V | A |
| Query Conservation |   |
. | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
| Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
| Template Sequence |   |
S | N | N | E | R | V | K | N | F | F | R | V | S | F | K | N | G | S | Q | S | Q | T | H | S | L | Q | A | N | D | T | F | N | K | Q | Q | W | L | N | C | I | R | Q | A |
| Template Known Secondary structure |   |
S |  |  |  |  | T | S | S |  |  |  |  |  |  |
|
| G | G | G |
|  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|