Job Description A1A535 Confidence 65.94% Date Wed Jul 10 14:03:03 BST 2013 Rank 144 Aligned Residues 282 % Identity 11% Template c2x19B_ PDB info PDB header:nuclear transport Chain: B: PDB Molecule:importin-13; PDBTitle: crystal structure of importin13 - rangtp complex Resolution 2.80 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	A	L	E	Q	I	K	V	I	S	S	S	L	D	Y	Q	T	N	N	N	D	Q	A	V	V	E	I	C	I	T	R	I	T	T	A	I	R	E	T	E	S	I	E	K	H	A	R	A	L	V	G	L	W	D	S	C	L	E
Query Conservation
Alig confidence																		.	.																					.
Template Conservation																		.	.																					.
Template Sequence		A	A	N	I	V	A	V	S	Q	D	V	L	X	K	Q	I	.	.	H	K	T	S	Q	C	X	W	L	X	Q	A	L	G	F	L	L	S	A	L	.	Q	V	E	E	I	L	K	N	L	H	S	L	I	S	P	Y	I	Q	Q	L	E
Template Known Secondary structure															T	T		.	.	S																	T	T	S	.
Template Predicted Secondary structure																		.	.																					.
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.			.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		H	N	L	R	P	A	G	K	D	E	D	T	P	H	A	K	I	A	S	D	I	M	S	C	I	L	Q	N	Y	N	R	.	.	.	.	.	.	.	.	.	T	P	V	M	V	L	A	V	P	I	A	V	K	F	L	H	R	.	.	G
Query Conservation																																	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		K	L	A	E	E	I	P	N	P	S	N	K	L	A	I	V	H	I	L	G	L	L	S	N	L	F	T	T	L	D	I	S	H	H	E	G	P	N	P	V	V	V	V	L	Q	Q	V	F	Q	L	I	Q	K	V	L	S	K	W	L	N
Template Known Secondary structure					S	S		S																								S	S																											T	T
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.
Predicted Secondary structure																																						.	.	.	.	.																.	.
Query SS confidence																																						.	.	.	.	.																.	.
Query Sequence		S	K	E	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I	L	Q	.	.	.	.	.	G	N	A	M	L	L	R	V	L	P	A	V	Y	E	K	.	.	Q	P
Query Conservation																																						.	.	.	.	.																.	.
Alig confidence																																						.	.	.	.	.																.	.
Template Conservation
Template Sequence		D	A	Q	V	V	E	A	V	C	A	I	F	E	K	S	V	K	T	L	L	D	D	F	A	P	X	V	P	Q	L	C	E	X	L	G	R	X	Y	S	T	I	P	Q	A	S	A	L	D	L	T	R	Q	L	V	H	I	F	A	H	E
Template Known Secondary structure																				S	S	S	T	T	G	G	G															S																	T	T
Template Predicted Secondary structure
Template SS confidence
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	I	N	R	H	L	A	E	L	L	A	L	M	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	K	D	S	T	Y	N	D	I
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	H	F	P	P	I	E	A	L	F	.	.	.	.	.	.	.	.	.	.	L	L	V	T	S	V	T	L	T	L	F	Q	Q	G	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	I	V	D	S
Template Known Secondary structure		T	T	T									.	.	.	.	.	.	.	.	.	.															T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.											.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.																.	.	.	.	790	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	N	I	L	I	E	I	A	G	H	E	P	L	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G	H	V	D	E	E	R	A	R	S	C	L	R	Y	L	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		F	X	Q	L	L	A	Q	A	L	K	R	K	P	D	L	F	L	.	.	.	.	.	.	.	.	.	.	C	E	R	L	D	V	K	A	V	F	Q	C	A	V	L	A	L	K	F	P	E	A	P	T	V	K	A	S	C	G	F	F	T
Template Known Secondary structure														G	G	G	G	G	.	.	.	.	.	.	.	.	.	.		T	T	S													T	T		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.											810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
		314	.	.	.	.											.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	L	A	N	.	.	.	.	.	.	.	.	.	.	M	E	H	P	F	H	H	I	L	L	L	E	I	K	S	I	T	D	A	F	S	S	I	L	G	P	H	S	R	D	I	F	R
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	L	P	R	C	G	E	V	E	S	V	G	K	V	V	Q	E	D	G	R	X	L	L	I	A	V	L	E	A	I	G	G	Q	A	S	R	S	L	X	D	C	F	A	D	I	L	F
Template Known Secondary structure				G	G	G	T	T	S	S							T	T	T	S													T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		843	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D