Return to main results Retrieve Phyre Job Id

Job DescriptionA1A535
Confidence98.71%DateWed Jul 10 14:03:03 BST 2013
Rank34Aligned Residues105
% Identity21%Templatec2r09A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytohesin-3; PDBTitle: crystal structure of autoinhibited form of grp1 arf gtpase exchange2 factor
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   717..720.........730.........740.........750.........760.........770......
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  PLIEGKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDPPIELSKVQSVKAVA
Query Conservation 
 








 



 


 








 
      

 
     


 







 
Alig confidence 












...




























.













Template Conservation    




 
    ... 









    
 



  
  
 
. 
 
    
     
Template Sequence  PDREGWLLKLGGR. . . VKTWKRRWFILTDNCLYYFEYTTDKEPRG. IIPLENLSIREVED
Template Known Secondary structure 


SS...S

TTSSTT
SS
S.
TT


Template Predicted Secondary structure 










...












.






Template SS confidence 



























































   265....270....... ..280.........290.........300...... ...310.........320
 
   777.. 780.........790.........800.........810.........
Predicted Secondary structure 


.................















Query SS confidence 


. . . . . . . . . . . . . . . . .







































Query Sequence  KKR. . . . . . . . . . . . . . . . . RDRSLPRAFEIFTDSKTYVFKAKDEKNAEEWLQCINVALA
Query Conservation    
.................  
 









 

 





 









 



Alig confidence 


.................







































Template Conservation          
                          
 
 
 





   

 

  

 
Template Sequence  PRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWXKSIKASIS
Template Known Secondary structure  SS
SS
SSSTT





TTS



S

SS
Template Predicted Secondary structure 






























Template SS confidence 



























































   321........330.........340.........350.........360.........370.........380
 
   820.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  QAKERE
Query Conservation 

 


Alig confidence 





Template Conservation    
   
Template Sequence  RDPFYD
Template Known Secondary structure 

Template Predicted Secondary structure 



Template SS confidence 





   381.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D