 |
| Job Description | A1A535 | | Confidence | 98.71% | Date | Wed Jul 10 14:03:03 BST 2013 |
| Rank | 33 | Aligned Residues | 109 |
| % Identity | 14% | Template | c2lkoA_ |
| PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:fermitin family homolog 2; |
PDBTitle: structural basis of phosphoinositide binding to kindlin-2 pleckstrin2 homology domain in regulating integrin activation
|
| Resolution | UNK |
|
 |
|   |   |
715 | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | P | L | I | E | G | K | L | K | E | K | Q | V | R | W | K | F | I | K | R | W | K | T | R | Y | F | T | L | A | G | N | Q | L | L | F | Q | K | G | K | S | K | D | D | P | D | D | P | P | I | E | L | S | K | V | Q | S | V | K | A |
| Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |
|
|
|   |   |   |
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|
|
| . | . |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
| Template Sequence |   |
S | I | P | E | L | A | D | Y | I | K | V | F | K | P | K | K | L | T | L | K | G | Y | K | Q | Y | W | C | T | F | K | D | T | S | I | S | C | Y | K | . |
. |
S | K | E | E | S | S | G | T | P | A | H | Q | M | N | L | R | G | C | E | V |
| Template Known Secondary structure |   |
| S | S |
|
|  |  |  |  |  |  |  |
|
|
| S | S |
|
|
|
|
|  |  |  |  |  |  |  |
| S | S | S |  |  |  |
| S | . | . |
| S |
| T | T | T |
|
|
| S |  |  |  |
|
|
|
|
|  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | |
|
. | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . |
|   |
|   |   |
775 | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | |
|
|
|
. | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | A | K | K | R | R | D | R | S | L | P | R | A | F | E | I | F | T | D | S | K | . |
. |
. |
. |
T | Y | V | F | K | A | K | D | E | K | N | A | E | E | W | L | Q | C | I | N | V | A | L | A | Q | A | K | E | R | E | S |
| Query Conservation |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
| . | . | . | . |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |
| Template Sequence |   |
T | P | D | V | N | I | S | G | Q | . |
K | F | N | I | K | L | L | I | P | V | A | E | G | M | N | E | I | W | L | R | C | D | N | E | K | Q | Y | A | H | W | M | A | A | C | R | L | A | S | K | G | K | T | M | A | D | S |
| Template Known Secondary structure |   |
 |
|
|  |  | T | T | T | T | . |  |  |
|
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | S |  |
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
429 | 430 | . | . | . | . | . | . | . | |
. | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|