Job Description A1A535 Confidence 97.03% Date Wed Jul 10 14:03:03 BST 2013 Rank 91 Aligned Residues 276 % Identity 12% Template c2jkrL_ PDB info PDB header:endocytosis Chain: L: PDB Molecule:ap-2 complex subunit alpha-2; PDBTitle: ap2 clathrin adaptor core with dileucine peptide rm(2 phosphos)qikrllse Resolution 2.98 Å Model Dimensions (Å) X:59.648 Y:64.283 Z:51.634

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		53	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.		.	.	.
Predicted Secondary structure													.																																									.				.
Query SS confidence													.																																									.				.
Query Sequence		N	D	Q	A	V	V	E	I	C	I	T	.	R	I	T	T	A	I	R	E	T	E	S	I	E	K	H	A	R	A	L	V	G	L	W	D	S	C	L	E	H	N	L	R	P	A	G	K	D	E	D	T	.	P	H	A	.	K	I	A
Query Conservation													.																																									.				.
Alig confidence													.													.	.	.	.															.	.	.	.	.	.	.	.			.				.
Template Conservation																										.	.	.	.															.	.	.	.	.	.	.	.
Template Sequence		A	S	R	N	P	T	F	M	G	L	A	L	H	C	I	A	N	V	G	S	R	E	M	A	.	.	.	.	E	A	F	A	G	E	I	P	K	I	L	V	A	G	.	.	.	.	.	.	.	.	D	T	M	D	S	V	K	Q	S	A
Template Known Secondary structure			S																							.	.	.	.				T	T									T	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																										.	.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	I	M	S	C	I	L	Q	N	Y	N	R	T	P	V	M	V	L	A	V	P	I	A	V	K	F	L	H	R	G	S	K	E	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	C	L	L	R	L	Y	R	T	S	P	D	L	V	P	M	G	D	W	T	S	R	V	V	H	L	L	N	D	Q	H	L	G	V	V	T	A	A	T	S	L	I	T	T	L	A	Q	K	N	P	E	E	F	K	T	S	V	S	L
Template Known Secondary structure													T	T	T	S				T							G	G	G	G		S	S															T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.																						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	K	S	I	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	A	M	L	L	R	V	L	P	A	V	Y	E	K	Q	P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	S
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	S	R	L	S	R	I	V	T	S	A	S	T	D	L	Q	D	Y	T	Y	Y	F	V	P	A	P	W	L	S	V	K	L	L	R	L	L	Q	C	Y	P	P	P	E	D	P	A	V	R	G	R	L	T	E	C	L	E	T	I	L
Template Known Secondary structure										T	T	S		S	S	S	S	T	T	T			T	T			S												T	T	S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		209	210	.	.	.													.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.
Query Sequence		Q	L	E	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	.	R	K	D	V	E	V	V	Q	K	C	V	P	F	L	I	R	N	L	.	.	K	D	S	T	Y	N	D	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.
Template Conservation
Template Sequence		N	K	A	Q	E	P	P	K	S	K	K	V	Q	H	S	N	A	K	N	A	V	L	F	E	A	I	S	L	I	I	H	H	D	S	E	P	N	L	L	V	R	A	C	N	Q	L	G	Q	F	L	Q	H	R	E	T	N	L	R	Y	L
Template Known Secondary structure						S			S			S																																									S	S		S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		I	L	N	I	L	I	E	I	A	G	H	E	P	L	.	.	A	L	N	S	F	L	P	M	L	K	E	I	A	E	Q	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G	H	V	D	E	E	R	A	R	S	C	L	R	Y
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		A	L	E	S	M	C	T	L	A	S	S	E	F	S	H	E	A	V	K	T	H	I	E	T	V	I	N	A	L	K	T	E	R	D	V	S	V	R	Q	R	A	V	D	L	L	Y	A	M	C	D	R	S	N	A	Q	Q	I	V	A	E
Template Known Secondary structure										T	T		S	S	S		S	G	G	G	G	G													S													T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	Q	L	A	N	M	E	H	P	F	H	H	I	L	L	L	E	I	K	S	I	T	D	A	F	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	S	Y	L	E	T	A	D	Y	S	I	R	E	E	I	V	L	K	V	A	I	L	A	E	K	Y	A	V
Template Known Secondary structure								T																						S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D