Job Description A1A535 Confidence 80.97% Date Wed Jul 10 14:03:03 BST 2013 Rank 134 Aligned Residues 126 % Identity 20% Template c2fugA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å Model Dimensions (Å) X:45.290 Y:39.051 Z:44.971

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		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.			.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.															.	.
Predicted Secondary structure																		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	Q	P	W	I	Q	V	M	F	L	S	Q	Q	S	L	.	.	F	P	E	P	L	S	I	Q	S	G	S	V	Q	F	L	K	A	L	W	E	K	T	Q	D	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H
Query Conservation																		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	H	L	L	I	E	G	M	I	L	A	G	Y	A	I	R	A	T	V	G	Y	I	Y	V	R	G	E	Y	R	R	A	A	D	R	L	E	Q	A	I	K	E	A	R	A	R	G	Y	L	G	K	N	L	F	G	T	D	F	S	F
Template Known Secondary structure																		T										T	T																		T	T	S	S	B	S	S	T	T	S	T	T			B
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.			690	.	.	.	.	.	.	.	.	.		700	.	.	.	.	.	.	.	.				.
Predicted Secondary structure																																				.	.											.										.	.	.
Query SS confidence																																				.	.											.										.	.	.
Query Sequence		S	F	E	V	A	M	T	E	S	T	F	P	Q	Q	K	D	L	E	Q	L	Q	L	H	L	E	E	V	R	F	F	D	V	F	G	.	.	F	S	E	T	A	G	A	W	Q	C	.	F	M	C	N	N	P	E	K	A	.	.	.	T
Query Conservation																																				.	.											.										.	.	.
Alig confidence																		.																		.	.											.										.	.	.
Template Conservation																		.
Template Sequence		D	L	H	V	H	R	G	A	G	A	Y	I	C	G	E	E	.	T	A	L	M	N	S	L	E	G	L	R	A	N	P	R	L	K	P	P	F	P	A	Q	S	G	L	W	G	K	P	T	T	I	N	N	V	E	T	L	A	S	V	V
Template Known Secondary structure										S		G	G	G	G	S		.								T	T	S							S	S	S		T	T	T	S	B	G	G	G	B
Template Predicted Secondary structure																		.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	N	Q	D	G	Q	P	L	I	E	G	K	L	K	E	K	Q	V	R	W	K	F	I	K	R	W	K	T	R	Y	F	T	L	A	G	N
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		P	I	M	E	R	G	A	D	W	F	A	Q	M	G	T	E	Q	S	K	.	.	.	.	.	.	.	.	G	M	K	L	Y	Q	I	S	G	P
Template Known Secondary structure						S							S	S	B		S	S		B	.	.	.	.	.	.	.	.	S								S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D